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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 7-26371849-G-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=7&pos=26371849&ref=G&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "7",
"pos": 26371849,
"ref": "G",
"alt": "C",
"effect": "missense_variant",
"transcript": "NM_001318198.1",
"consequences": [
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "NM_013322.3",
"protein_id": "NP_037454.2",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 588,
"cdna_end": null,
"cdna_length": 2665,
"mane_select": "ENST00000338523.9",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_013322.3"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000338523.9",
"protein_id": "ENSP00000343709.5",
"transcript_support_level": 1,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 588,
"cdna_end": null,
"cdna_length": 2665,
"mane_select": "NM_013322.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000338523.9"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000396376.5",
"protein_id": "ENSP00000379661.1",
"transcript_support_level": 1,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 468,
"cdna_end": null,
"cdna_length": 2491,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000396376.5"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000446848.6",
"protein_id": "ENSP00000395474.3",
"transcript_support_level": 1,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 602,
"cdna_end": null,
"cdna_length": 2613,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000446848.6"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 4,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.88G>C",
"hgvs_p": "p.Asp30His",
"transcript": "ENST00000409838.1",
"protein_id": "ENSP00000386540.1",
"transcript_support_level": 1,
"aa_start": 30,
"aa_end": null,
"aa_length": 117,
"cds_start": 88,
"cds_end": null,
"cds_length": 354,
"cdna_start": 306,
"cdna_end": null,
"cdna_length": 944,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000409838.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 3,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "n.366G>C",
"hgvs_p": null,
"transcript": "ENST00000462993.1",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 806,
"mane_select": null,
"mane_plus": null,
"biotype": "pseudogene",
"feature": "ENST00000462993.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.418G>C",
"hgvs_p": "p.Asp140His",
"transcript": "NM_001318198.1",
"protein_id": "NP_001305127.1",
"transcript_support_level": null,
"aa_start": 140,
"aa_end": null,
"aa_length": 227,
"cds_start": 418,
"cds_end": null,
"cds_length": 684,
"cdna_start": 676,
"cdna_end": null,
"cdna_length": 2699,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001318198.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.418G>C",
"hgvs_p": "p.Asp140His",
"transcript": "NM_001362753.1",
"protein_id": "NP_001349682.1",
"transcript_support_level": null,
"aa_start": 140,
"aa_end": null,
"aa_length": 227,
"cds_start": 418,
"cds_end": null,
"cds_length": 684,
"cdna_start": 821,
"cdna_end": null,
"cdna_length": 2844,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001362753.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.418G>C",
"hgvs_p": "p.Asp140His",
"transcript": "NM_001362754.1",
"protein_id": "NP_001349683.1",
"transcript_support_level": null,
"aa_start": 140,
"aa_end": null,
"aa_length": 227,
"cds_start": 418,
"cds_end": null,
"cds_length": 684,
"cdna_start": 740,
"cdna_end": null,
"cdna_length": 2763,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001362754.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.406G>C",
"hgvs_p": "p.Asp136His",
"transcript": "ENST00000698087.1",
"protein_id": "ENSP00000513557.1",
"transcript_support_level": null,
"aa_start": 136,
"aa_end": null,
"aa_length": 223,
"cds_start": 406,
"cds_end": null,
"cds_length": 672,
"cdna_start": 941,
"cdna_end": null,
"cdna_length": 2932,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000698087.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.406G>C",
"hgvs_p": "p.Asp136His",
"transcript": "ENST00000911861.1",
"protein_id": "ENSP00000581920.1",
"transcript_support_level": null,
"aa_start": 136,
"aa_end": null,
"aa_length": 223,
"cds_start": 406,
"cds_end": null,
"cds_length": 672,
"cdna_start": 571,
"cdna_end": null,
"cdna_length": 2590,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000911861.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "NM_001199835.1",
"protein_id": "NP_001186764.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 602,
"cdna_end": null,
"cdna_length": 2625,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001199835.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "NM_001318199.3",
"protein_id": "NP_001305128.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 491,
"cdna_end": null,
"cdna_length": 2568,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001318199.3"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000698078.1",
"protein_id": "ENSP00000513550.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 599,
"cdna_end": null,
"cdna_length": 2599,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000698078.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000698079.1",
"protein_id": "ENSP00000513551.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 517,
"cdna_end": null,
"cdna_length": 2517,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000698079.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000698080.1",
"protein_id": "ENSP00000513552.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 882,
"cdna_end": null,
"cdna_length": 2882,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000698080.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000698088.1",
"protein_id": "ENSP00000513558.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 519,
"cdna_end": null,
"cdna_length": 2519,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000698088.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000698090.1",
"protein_id": "ENSP00000513560.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 879,
"cdna_end": null,
"cdna_length": 2879,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000698090.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000905668.1",
"protein_id": "ENSP00000575727.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 718,
"cdna_end": null,
"cdna_length": 2737,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905668.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000905669.1",
"protein_id": "ENSP00000575728.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 689,
"cdna_end": null,
"cdna_length": 2708,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905669.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000905670.1",
"protein_id": "ENSP00000575729.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 678,
"cdna_end": null,
"cdna_length": 2697,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905670.1"
},
{
"aa_ref": "D",
"aa_alt": "H",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "SNX10",
"gene_hgnc_id": 14974,
"hgvs_c": "c.340G>C",
"hgvs_p": "p.Asp114His",
"transcript": "ENST00000905671.1",
"protein_id": "ENSP00000575730.1",
"transcript_support_level": null,
"aa_start": 114,
"aa_end": null,
"aa_length": 201,
"cds_start": 340,
"cds_end": null,
"cds_length": 606,
"cdna_start": 647,
"cdna_end": null,
"cdna_length": 2666,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000905671.1"
},
{
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"bayesdelnoaf_prediction": "Pathogenic",
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{
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"PP3_Moderate"
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"verdict": "Uncertain_significance",
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{
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"verdict": "Uncertain_significance",
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],
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"clinvar_review_status": "",
"clinvar_submissions_summary": "",
"phenotype_combined": null,
"pathogenicity_classification_combined": null,
"custom_annotations": null
}
],
"message": null
}