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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 7-80669964-T-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=7&pos=80669964&ref=T&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "7",
"pos": 80669964,
"ref": "T",
"alt": "G",
"effect": "missense_variant",
"transcript": "NM_000072.3",
"consequences": [
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001001548.3",
"protein_id": "NP_001001548.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000447544.7",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001001548.3"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000447544.7",
"protein_id": "ENSP00000415743.2",
"transcript_support_level": 5,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001001548.3",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000447544.7"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000309881.11",
"protein_id": "ENSP00000308165.7",
"transcript_support_level": 1,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000309881.11"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000394788.7",
"protein_id": "ENSP00000378268.3",
"transcript_support_level": 1,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000394788.7"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000432207.5",
"protein_id": "ENSP00000411411.1",
"transcript_support_level": 1,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000432207.5"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000419819.2",
"protein_id": "ENSP00000392298.2",
"transcript_support_level": 1,
"aa_start": 254,
"aa_end": null,
"aa_length": 462,
"cds_start": 760,
"cds_end": null,
"cds_length": 1391,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000419819.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": true,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 2,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "n.588T>G",
"hgvs_p": null,
"transcript": "ENST00000464213.1",
"protein_id": null,
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "retained_intron",
"feature": "ENST00000464213.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_000072.3",
"protein_id": "NP_000063.2",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_000072.3"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001001547.3",
"protein_id": "NP_001001547.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001001547.3"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001127443.2",
"protein_id": "NP_001120915.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001127443.2"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001127444.2",
"protein_id": "NP_001120916.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001127444.2"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001371074.1",
"protein_id": "NP_001358003.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001371074.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001371075.1",
"protein_id": "NP_001358004.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001371075.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001371077.1",
"protein_id": "NP_001358006.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001371077.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "NM_001371078.1",
"protein_id": "NP_001358007.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001371078.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000435819.5",
"protein_id": "ENSP00000399421.1",
"transcript_support_level": 2,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000435819.5"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000855923.1",
"protein_id": "ENSP00000525982.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000855923.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000855924.1",
"protein_id": "ENSP00000525983.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000855924.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000855925.1",
"protein_id": "ENSP00000525984.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000855925.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000855926.1",
"protein_id": "ENSP00000525985.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000855926.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000855927.1",
"protein_id": "ENSP00000525986.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000855927.1"
},
{
"aa_ref": "F",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "CD36",
"gene_hgnc_id": 1663,
"hgvs_c": "c.760T>G",
"hgvs_p": "p.Phe254Val",
"transcript": "ENST00000855928.1",
"protein_id": "ENSP00000525987.1",
"transcript_support_level": null,
"aa_start": 254,
"aa_end": null,
"aa_length": 472,
"cds_start": 760,
"cds_end": null,
"cds_length": 1419,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000855928.1"
},
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"clinvar_submissions_summary": "",
"phenotype_combined": null,
"pathogenicity_classification_combined": null,
"custom_annotations": null
}
],
"message": null
}