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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 7-95291168-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=7&pos=95291168&ref=T&alt=C&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "7",
"pos": 95291168,
"ref": "T",
"alt": "C",
"effect": "3_prime_UTR_variant",
"transcript": "NM_001166160.2",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "NM_001166160.2",
"protein_id": "NP_001159632.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1374,
"cds_start": null,
"cds_end": null,
"cds_length": 4125,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000433360.6",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001166160.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000433360.6",
"protein_id": "ENSP00000405514.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1374,
"cds_start": null,
"cds_end": null,
"cds_length": 4125,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001166160.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000433360.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000456331.6",
"protein_id": "ENSP00000402893.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1253,
"cds_start": null,
"cds_end": null,
"cds_length": 3762,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000456331.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 19,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000969576.1",
"protein_id": "ENSP00000639635.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1356,
"cds_start": null,
"cds_end": null,
"cds_length": 4071,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000969576.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000969570.1",
"protein_id": "ENSP00000639629.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1344,
"cds_start": null,
"cds_end": null,
"cds_length": 4035,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000969570.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000969571.1",
"protein_id": "ENSP00000639630.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1336,
"cds_start": null,
"cds_end": null,
"cds_length": 4011,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000969571.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 19,
"exon_rank_end": null,
"exon_count": 19,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000861925.1",
"protein_id": "ENSP00000531984.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1314,
"cds_start": null,
"cds_end": null,
"cds_length": 3945,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000861925.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 18,
"exon_rank_end": null,
"exon_count": 18,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "NM_001166161.1",
"protein_id": "NP_001159633.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1296,
"cds_start": null,
"cds_end": null,
"cds_length": 3891,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001166161.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 17,
"exon_rank_end": null,
"exon_count": 17,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "NM_001166162.1",
"protein_id": "NP_001159634.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1253,
"cds_start": null,
"cds_end": null,
"cds_length": 3762,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001166162.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "NM_017650.3",
"protein_id": "NP_060120.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1098,
"cds_start": null,
"cds_end": null,
"cds_length": 3297,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_017650.3"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000340694.8",
"protein_id": "ENSP00000344524.4",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1098,
"cds_start": null,
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"cds_length": 3297,
"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000340694.8"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "ENST00000433881.5",
"protein_id": "ENSP00000398870.1",
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": 1098,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000433881.5"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
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"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "NM_001166163.1",
"protein_id": "NP_001159635.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 1090,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "NM_001166163.1"
},
{
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"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 15,
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"exon_count": 15,
"intron_rank": null,
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"gene_symbol": "PPP1R9A",
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"hgvs_c": "c.*865T>C",
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"transcript": "ENST00000969574.1",
"protein_id": "ENSP00000639633.1",
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "ENST00000969574.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "XM_047420573.1",
"protein_id": "XP_047276529.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"mane_select": null,
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"biotype": "protein_coding",
"feature": "XM_047420573.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 22,
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"exon_count": 22,
"intron_rank": null,
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"gene_symbol": "PPP1R9A",
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"hgvs_c": "c.*865T>C",
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"biotype": "protein_coding",
"feature": "XM_047420574.1"
},
{
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
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"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "XM_047420575.1",
"protein_id": "XP_047276531.1",
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"aa_start": null,
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"biotype": "protein_coding",
"feature": "XM_047420575.1"
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 21,
"exon_rank_end": null,
"exon_count": 21,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "XM_011516381.2",
"protein_id": "XP_011514683.1",
"transcript_support_level": null,
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},
{
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"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 22,
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"exon_count": 22,
"intron_rank": null,
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"gene_symbol": "PPP1R9A",
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"hgvs_c": "c.*865T>C",
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"feature": "XM_047420576.1"
},
{
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"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
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"exon_count": 21,
"intron_rank": null,
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"gene_symbol": "PPP1R9A",
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"hgvs_c": "c.*865T>C",
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"transcript": "XM_047420577.1",
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},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 22,
"exon_rank_end": null,
"exon_count": 22,
"intron_rank": null,
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"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "XM_017012395.2",
"protein_id": "XP_016867884.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 1365,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_017012395.2"
},
{
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"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 20,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "PPP1R9A",
"gene_hgnc_id": 14946,
"hgvs_c": "c.*865T>C",
"hgvs_p": null,
"transcript": "XM_017012396.2",
"protein_id": "XP_016867885.1",
"transcript_support_level": null,
"aa_start": null,
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"aa_length": 1360,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "XM_017012396.2"
},
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