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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 8-17653275-T-C (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=8&pos=17653275&ref=T&alt=C&genome=hg38&allGenes=true"
API Response
json
{
"variants": [
{
"chr": "8",
"pos": 17653275,
"ref": "T",
"alt": "C",
"effect": "missense_variant",
"transcript": "NM_001363059.2",
"consequences": [
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val",
"transcript": "NM_001363059.2",
"protein_id": "NP_001349988.1",
"transcript_support_level": null,
"aa_start": 1099,
"aa_end": null,
"aa_length": 1270,
"cds_start": 3295,
"cds_end": null,
"cds_length": 3813,
"cdna_start": 3483,
"cdna_end": null,
"cdna_length": 6125,
"mane_select": "ENST00000693296.1",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val",
"transcript": "ENST00000693296.1",
"protein_id": "ENSP00000509719.1",
"transcript_support_level": null,
"aa_start": 1099,
"aa_end": null,
"aa_length": 1270,
"cds_start": 3295,
"cds_end": null,
"cds_length": 3813,
"cdna_start": 3483,
"cdna_end": null,
"cdna_length": 6125,
"mane_select": "NM_001363059.2",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val",
"transcript": "ENST00000262102.10",
"protein_id": "ENSP00000262102.6",
"transcript_support_level": 1,
"aa_start": 1099,
"aa_end": null,
"aa_length": 1270,
"cds_start": 3295,
"cds_end": null,
"cds_length": 3813,
"cdna_start": 3520,
"cdna_end": null,
"cdna_length": 6160,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.793A>G",
"hgvs_p": "p.Ile265Val",
"transcript": "ENST00000297488.10",
"protein_id": "ENSP00000297488.6",
"transcript_support_level": 1,
"aa_start": 265,
"aa_end": null,
"aa_length": 436,
"cds_start": 793,
"cds_end": null,
"cds_length": 1311,
"cdna_start": 1086,
"cdna_end": null,
"cdna_length": 3731,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "n.*1043A>G",
"hgvs_p": null,
"transcript": "ENST00000520196.5",
"protein_id": "ENSP00000431016.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5205,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"3_prime_UTR_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "n.*1043A>G",
"hgvs_p": null,
"transcript": "ENST00000520196.5",
"protein_id": "ENSP00000431016.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5205,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val",
"transcript": "NM_001363057.2",
"protein_id": "NP_001349986.1",
"transcript_support_level": null,
"aa_start": 1099,
"aa_end": null,
"aa_length": 1282,
"cds_start": 3295,
"cds_end": null,
"cds_length": 3849,
"cdna_start": 3483,
"cdna_end": null,
"cdna_length": 6121,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val",
"transcript": "NM_001001924.3",
"protein_id": "NP_001001924.1",
"transcript_support_level": null,
"aa_start": 1099,
"aa_end": null,
"aa_length": 1270,
"cds_start": 3295,
"cds_end": null,
"cds_length": 3813,
"cdna_start": 3769,
"cdna_end": null,
"cdna_length": 6411,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 13,
"exon_rank_end": null,
"exon_count": 16,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val",
"transcript": "NM_001363058.2",
"protein_id": "NP_001349987.1",
"transcript_support_level": null,
"aa_start": 1099,
"aa_end": null,
"aa_length": 1270,
"cds_start": 3295,
"cds_end": null,
"cds_length": 3813,
"cdna_start": 3541,
"cdna_end": null,
"cdna_length": 6183,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 12,
"exon_rank_end": null,
"exon_count": 15,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val",
"transcript": "NM_001363061.2",
"protein_id": "NP_001349990.1",
"transcript_support_level": null,
"aa_start": 1099,
"aa_end": null,
"aa_length": 1270,
"cds_start": 3295,
"cds_end": null,
"cds_length": 3813,
"cdna_start": 3510,
"cdna_end": null,
"cdna_length": 6152,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3133A>G",
"hgvs_p": "p.Ile1045Val",
"transcript": "NM_001363060.2",
"protein_id": "NP_001349989.1",
"transcript_support_level": null,
"aa_start": 1045,
"aa_end": null,
"aa_length": 1228,
"cds_start": 3133,
"cds_end": null,
"cds_length": 3687,
"cdna_start": 3321,
"cdna_end": null,
"cdna_length": 5959,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3133A>G",
"hgvs_p": "p.Ile1045Val",
"transcript": "NM_001001925.3",
"protein_id": "NP_001001925.1",
"transcript_support_level": null,
"aa_start": 1045,
"aa_end": null,
"aa_length": 1216,
"cds_start": 3133,
"cds_end": null,
"cds_length": 3651,
"cdna_start": 3607,
"cdna_end": null,
"cdna_length": 6249,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3133A>G",
"hgvs_p": "p.Ile1045Val",
"transcript": "NM_001363062.2",
"protein_id": "NP_001349991.1",
"transcript_support_level": null,
"aa_start": 1045,
"aa_end": null,
"aa_length": 1216,
"cds_start": 3133,
"cds_end": null,
"cds_length": 3651,
"cdna_start": 3321,
"cdna_end": null,
"cdna_length": 5963,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3133A>G",
"hgvs_p": "p.Ile1045Val",
"transcript": "ENST00000381869.5",
"protein_id": "ENSP00000371293.3",
"transcript_support_level": 5,
"aa_start": 1045,
"aa_end": null,
"aa_length": 1216,
"cds_start": 3133,
"cds_end": null,
"cds_length": 3651,
"cdna_start": 3607,
"cdna_end": null,
"cdna_length": 6256,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 13,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.3133A>G",
"hgvs_p": "p.Ile1045Val",
"transcript": "ENST00000519263.5",
"protein_id": "ENSP00000430167.1",
"transcript_support_level": 2,
"aa_start": 1045,
"aa_end": null,
"aa_length": 1216,
"cds_start": 3133,
"cds_end": null,
"cds_length": 3651,
"cdna_start": 3307,
"cdna_end": null,
"cdna_length": 4089,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.1036A>G",
"hgvs_p": "p.Ile346Val",
"transcript": "NM_001001931.3",
"protein_id": "NP_001001931.1",
"transcript_support_level": null,
"aa_start": 346,
"aa_end": null,
"aa_length": 517,
"cds_start": 1036,
"cds_end": null,
"cds_length": 1554,
"cdna_start": 1124,
"cdna_end": null,
"cdna_length": 3766,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.1036A>G",
"hgvs_p": "p.Ile346Val",
"transcript": "ENST00000381861.7",
"protein_id": "ENSP00000371285.3",
"transcript_support_level": 2,
"aa_start": 346,
"aa_end": null,
"aa_length": 517,
"cds_start": 1036,
"cds_end": null,
"cds_length": 1554,
"cdna_start": 1356,
"cdna_end": null,
"cdna_length": 3996,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 7,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.793A>G",
"hgvs_p": "p.Ile265Val",
"transcript": "NM_020749.5",
"protein_id": "NP_065800.1",
"transcript_support_level": null,
"aa_start": 265,
"aa_end": null,
"aa_length": 436,
"cds_start": 793,
"cds_end": null,
"cds_length": 1311,
"cdna_start": 1086,
"cdna_end": null,
"cdna_length": 3728,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.730A>G",
"hgvs_p": "p.Ile244Val",
"transcript": "NM_001166393.2",
"protein_id": "NP_001159865.1",
"transcript_support_level": null,
"aa_start": 244,
"aa_end": null,
"aa_length": 415,
"cds_start": 730,
"cds_end": null,
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"cdna_start": 1001,
"cdna_end": null,
"cdna_length": 3643,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 9,
"exon_rank_end": null,
"exon_count": 12,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.730A>G",
"hgvs_p": "p.Ile244Val",
"transcript": "ENST00000544260.3",
"protein_id": "ENSP00000445738.1",
"transcript_support_level": 2,
"aa_start": 244,
"aa_end": null,
"aa_length": 415,
"cds_start": 730,
"cds_end": null,
"cds_length": 1248,
"cdna_start": 1001,
"cdna_end": null,
"cdna_length": 3650,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.511A>G",
"hgvs_p": "p.Ile171Val",
"transcript": "NM_001330470.2",
"protein_id": "NP_001317399.1",
"transcript_support_level": null,
"aa_start": 171,
"aa_end": null,
"aa_length": 342,
"cds_start": 511,
"cds_end": null,
"cds_length": 1029,
"cdna_start": 674,
"cdna_end": null,
"cdna_length": 3316,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "I",
"aa_alt": "V",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"missense_variant"
],
"exon_rank": 6,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "c.511A>G",
"hgvs_p": "p.Ile171Val",
"transcript": "ENST00000634613.1",
"protein_id": "ENSP00000489288.1",
"transcript_support_level": 5,
"aa_start": 171,
"aa_end": null,
"aa_length": 342,
"cds_start": 511,
"cds_end": null,
"cds_length": 1029,
"cdna_start": 675,
"cdna_end": null,
"cdna_length": 1193,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 5,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
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"transcript": "ENST00000517413.5",
"protein_id": null,
"transcript_support_level": 2,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4303,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 8,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "n.990A>G",
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"transcript": "ENST00000518713.5",
"protein_id": null,
"transcript_support_level": 5,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1162,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 3,
"exon_rank_end": null,
"exon_count": 5,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "n.546A>G",
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"transcript": "ENST00000523471.5",
"protein_id": null,
"transcript_support_level": 4,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 828,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"non_coding_transcript_exon_variant"
],
"exon_rank": 11,
"exon_rank_end": null,
"exon_count": 14,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"hgvs_c": "n.3416A>G",
"hgvs_p": null,
"transcript": "NR_156437.2",
"protein_id": null,
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": -4,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6058,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
}
],
"gene_symbol": "MTUS1",
"gene_hgnc_id": 29789,
"dbsnp": "rs201400993",
"frequency_reference_population": 0.00006441498,
"hom_count_reference_population": 0,
"allele_count_reference_population": 100,
"gnomad_exomes_af": 0.0000357115,
"gnomad_genomes_af": 0.000328248,
"gnomad_exomes_ac": 50,
"gnomad_genomes_ac": 50,
"gnomad_exomes_homalt": 0,
"gnomad_genomes_homalt": 0,
"gnomad_mito_homoplasmic": null,
"gnomad_mito_heteroplasmic": null,
"computational_score_selected": 0.008882790803909302,
"computational_prediction_selected": "Benign",
"computational_source_selected": "MetaRNN",
"splice_score_selected": 0.07999999821186066,
"splice_prediction_selected": "Benign",
"splice_source_selected": "max_spliceai",
"revel_score": 0.076,
"revel_prediction": "Benign",
"alphamissense_score": 0.1686,
"alphamissense_prediction": null,
"bayesdelnoaf_score": -0.44,
"bayesdelnoaf_prediction": "Benign",
"phylop100way_score": 3.084,
"phylop100way_prediction": "Benign",
"spliceai_max_score": 0.08,
"spliceai_max_prediction": "Benign",
"dbscsnv_ada_score": null,
"dbscsnv_ada_prediction": null,
"apogee2_score": null,
"apogee2_prediction": null,
"mitotip_score": null,
"mitotip_prediction": null,
"acmg_score": -4,
"acmg_classification": "Likely_benign",
"acmg_criteria": "BP4_Strong",
"acmg_by_gene": [
{
"score": -4,
"benign_score": 4,
"pathogenic_score": 0,
"criteria": [
"BP4_Strong"
],
"verdict": "Likely_benign",
"transcript": "NM_001363059.2",
"gene_symbol": "MTUS1",
"hgnc_id": 29789,
"effects": [
"missense_variant"
],
"inheritance_mode": "AR",
"hgvs_c": "c.3295A>G",
"hgvs_p": "p.Ile1099Val"
}
],
"clinvar_disease": "not specified",
"clinvar_classification": "Uncertain significance",
"clinvar_review_status": "criteria provided, single submitter",
"clinvar_submissions_summary": "US:1",
"phenotype_combined": "not specified",
"pathogenicity_classification_combined": "Uncertain significance",
"custom_annotations": null
}
],
"message": null
}