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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 8-61517549-A-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=8&pos=61517549&ref=A&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "8",
      "pos": 61517549,
      "ref": "A",
      "alt": "C",
      "effect": "missense_variant",
      "transcript": "NM_001413844.1",
      "consequences": [
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2105T>G",
          "hgvs_p": "p.Ile702Ser",
          "transcript": "NM_004318.4",
          "protein_id": "NP_004309.2",
          "transcript_support_level": null,
          "aa_start": 702,
          "aa_end": null,
          "aa_length": 758,
          "cds_start": 2105,
          "cds_end": null,
          "cds_length": 2277,
          "cdna_start": 2326,
          "cdna_end": null,
          "cdna_length": 5301,
          "mane_select": "ENST00000379454.9",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_004318.4"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2105T>G",
          "hgvs_p": "p.Ile702Ser",
          "transcript": "ENST00000379454.9",
          "protein_id": "ENSP00000368767.4",
          "transcript_support_level": 1,
          "aa_start": 702,
          "aa_end": null,
          "aa_length": 758,
          "cds_start": 2105,
          "cds_end": null,
          "cds_length": 2277,
          "cdna_start": 2326,
          "cdna_end": null,
          "cdna_length": 5301,
          "mane_select": "NM_004318.4",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000379454.9"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2675T>G",
          "hgvs_p": "p.Ile892Ser",
          "transcript": "ENST00000950798.1",
          "protein_id": "ENSP00000620857.1",
          "transcript_support_level": null,
          "aa_start": 892,
          "aa_end": null,
          "aa_length": 948,
          "cds_start": 2675,
          "cds_end": null,
          "cds_length": 2847,
          "cdna_start": 2855,
          "cdna_end": null,
          "cdna_length": 3597,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000950798.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2105T>G",
          "hgvs_p": "p.Ile702Ser",
          "transcript": "NM_001413844.1",
          "protein_id": "NP_001400773.1",
          "transcript_support_level": null,
          "aa_start": 702,
          "aa_end": null,
          "aa_length": 785,
          "cds_start": 2105,
          "cds_end": null,
          "cds_length": 2358,
          "cdna_start": 2326,
          "cdna_end": null,
          "cdna_length": 5382,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001413844.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2105T>G",
          "hgvs_p": "p.Ile702Ser",
          "transcript": "ENST00000887974.1",
          "protein_id": "ENSP00000558033.1",
          "transcript_support_level": null,
          "aa_start": 702,
          "aa_end": null,
          "aa_length": 785,
          "cds_start": 2105,
          "cds_end": null,
          "cds_length": 2358,
          "cdna_start": 2325,
          "cdna_end": null,
          "cdna_length": 3148,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000887974.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2102T>G",
          "hgvs_p": "p.Ile701Ser",
          "transcript": "ENST00000887966.1",
          "protein_id": "ENSP00000558025.1",
          "transcript_support_level": null,
          "aa_start": 701,
          "aa_end": null,
          "aa_length": 784,
          "cds_start": 2102,
          "cds_end": null,
          "cds_length": 2355,
          "cdna_start": 2272,
          "cdna_end": null,
          "cdna_length": 4655,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000887966.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2150T>G",
          "hgvs_p": "p.Ile717Ser",
          "transcript": "NM_001413845.1",
          "protein_id": "NP_001400774.1",
          "transcript_support_level": null,
          "aa_start": 717,
          "aa_end": null,
          "aa_length": 773,
          "cds_start": 2150,
          "cds_end": null,
          "cds_length": 2322,
          "cdna_start": 2371,
          "cdna_end": null,
          "cdna_length": 5346,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001413845.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2150T>G",
          "hgvs_p": "p.Ile717Ser",
          "transcript": "ENST00000887927.1",
          "protein_id": "ENSP00000557986.1",
          "transcript_support_level": null,
          "aa_start": 717,
          "aa_end": null,
          "aa_length": 773,
          "cds_start": 2150,
          "cds_end": null,
          "cds_length": 2322,
          "cdna_start": 2434,
          "cdna_end": null,
          "cdna_length": 5409,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000887927.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2147T>G",
          "hgvs_p": "p.Ile716Ser",
          "transcript": "NM_001413846.1",
          "protein_id": "NP_001400775.1",
          "transcript_support_level": null,
          "aa_start": 716,
          "aa_end": null,
          "aa_length": 772,
          "cds_start": 2147,
          "cds_end": null,
          "cds_length": 2319,
          "cdna_start": 2368,
          "cdna_end": null,
          "cdna_length": 5343,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001413846.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2147T>G",
          "hgvs_p": "p.Ile716Ser",
          "transcript": "ENST00000887945.1",
          "protein_id": "ENSP00000558004.1",
          "transcript_support_level": null,
          "aa_start": 716,
          "aa_end": null,
          "aa_length": 772,
          "cds_start": 2147,
          "cds_end": null,
          "cds_length": 2319,
          "cdna_start": 2380,
          "cdna_end": null,
          "cdna_length": 4686,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000887945.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2063T>G",
          "hgvs_p": "p.Ile688Ser",
          "transcript": "ENST00000887960.1",
          "protein_id": "ENSP00000558019.1",
          "transcript_support_level": null,
          "aa_start": 688,
          "aa_end": null,
          "aa_length": 771,
          "cds_start": 2063,
          "cds_end": null,
          "cds_length": 2316,
          "cdna_start": 2280,
          "cdna_end": null,
          "cdna_length": 4659,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000887960.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 25,
          "exon_rank_end": null,
          "exon_count": 26,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2144T>G",
          "hgvs_p": "p.Ile715Ser",
          "transcript": "ENST00000950785.1",
          "protein_id": "ENSP00000620844.1",
          "transcript_support_level": null,
          "aa_start": 715,
          "aa_end": null,
          "aa_length": 771,
          "cds_start": 2144,
          "cds_end": null,
          "cds_length": 2316,
          "cdna_start": 2381,
          "cdna_end": null,
          "cdna_length": 4684,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000950785.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2060T>G",
          "hgvs_p": "p.Ile687Ser",
          "transcript": "ENST00000913382.1",
          "protein_id": "ENSP00000583441.1",
          "transcript_support_level": null,
          "aa_start": 687,
          "aa_end": null,
          "aa_length": 770,
          "cds_start": 2060,
          "cds_end": null,
          "cds_length": 2313,
          "cdna_start": 2197,
          "cdna_end": null,
          "cdna_length": 4580,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000913382.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2048T>G",
          "hgvs_p": "p.Ile683Ser",
          "transcript": "NM_001413847.1",
          "protein_id": "NP_001400776.1",
          "transcript_support_level": null,
          "aa_start": 683,
          "aa_end": null,
          "aa_length": 766,
          "cds_start": 2048,
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          "cdna_start": 2269,
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          "mane_select": null,
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          "biotype": "protein_coding",
          "feature": "NM_001413847.1"
        },
        {
          "aa_ref": "I",
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          "protein_coding": true,
          "strand": false,
          "consequences": [
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          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2048T>G",
          "hgvs_p": "p.Ile683Ser",
          "transcript": "ENST00000887970.1",
          "protein_id": "ENSP00000558029.1",
          "transcript_support_level": null,
          "aa_start": 683,
          "aa_end": null,
          "aa_length": 766,
          "cds_start": 2048,
          "cds_end": null,
          "cds_length": 2301,
          "cdna_start": 2183,
          "cdna_end": null,
          "cdna_length": 4565,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000887970.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 23,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2045T>G",
          "hgvs_p": "p.Ile682Ser",
          "transcript": "ENST00000887950.1",
          "protein_id": "ENSP00000558009.1",
          "transcript_support_level": null,
          "aa_start": 682,
          "aa_end": null,
          "aa_length": 765,
          "cds_start": 2045,
          "cds_end": null,
          "cds_length": 2298,
          "cdna_start": 2281,
          "cdna_end": null,
          "cdna_length": 4662,
          "mane_select": null,
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          "biotype": "protein_coding",
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        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2108T>G",
          "hgvs_p": "p.Ile703Ser",
          "transcript": "NM_001413848.1",
          "protein_id": "NP_001400777.1",
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          "biotype": "protein_coding",
          "feature": "NM_001413848.1"
        },
        {
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          "protein_coding": true,
          "strand": false,
          "consequences": [
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          ],
          "exon_rank": 24,
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          "exon_count": 25,
          "intron_rank": null,
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          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2108T>G",
          "hgvs_p": "p.Ile703Ser",
          "transcript": "ENST00000887973.1",
          "protein_id": "ENSP00000558032.1",
          "transcript_support_level": null,
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          "cds_start": 2108,
          "cds_end": null,
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          "cdna_start": 2317,
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          "mane_select": null,
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          "biotype": "protein_coding",
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        },
        {
          "aa_ref": "I",
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          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
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          "exon_count": 25,
          "intron_rank": null,
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          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2108T>G",
          "hgvs_p": "p.Ile703Ser",
          "transcript": "ENST00000887975.1",
          "protein_id": "ENSP00000558034.1",
          "transcript_support_level": null,
          "aa_start": 703,
          "aa_end": null,
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          "cds_start": 2108,
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          "cds_length": 2280,
          "cdna_start": 2309,
          "cdna_end": null,
          "cdna_length": 3051,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000887975.1"
        },
        {
          "aa_ref": "I",
          "aa_alt": "S",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 24,
          "exon_rank_end": null,
          "exon_count": 25,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "ASPH",
          "gene_hgnc_id": 757,
          "hgvs_c": "c.2105T>G",
          "hgvs_p": "p.Ile702Ser",
          "transcript": "NM_001413849.1",
          "protein_id": "NP_001400778.1",
          "transcript_support_level": null,
          "aa_start": 702,
          "aa_end": null,
          "aa_length": 758,
          "cds_start": 2105,
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      "clinvar_review_status": "",
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      "custom_annotations": null
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}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.