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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 8-71535183-T-G (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=8&pos=71535183&ref=T&alt=G&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "8",
      "pos": 71535183,
      "ref": "T",
      "alt": "G",
      "effect": "intron_variant",
      "transcript": "NM_001370333.1",
      "consequences": [
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "n.248+561A>C",
          "hgvs_p": null,
          "transcript": "ENST00000523987.4",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 1797,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000523987.4"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 19,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.33+561A>C",
          "hgvs_p": null,
          "transcript": "NM_001370333.1",
          "protein_id": "NP_001357262.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 621,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1866,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4076,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001370333.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 19,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.33+561A>C",
          "hgvs_p": null,
          "transcript": "ENST00000643681.1",
          "protein_id": "ENSP00000495390.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 621,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1866,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3938,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000643681.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 20,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.-129+561A>C",
          "hgvs_p": null,
          "transcript": "NM_001370334.1",
          "protein_id": "NP_001357263.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 592,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1779,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4109,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001370334.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 21,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.-344+561A>C",
          "hgvs_p": null,
          "transcript": "NM_001370335.1",
          "protein_id": "NP_001357264.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 592,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1779,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4365,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001370335.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 21,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.-344+561A>C",
          "hgvs_p": null,
          "transcript": "ENST00000645793.1",
          "protein_id": "ENSP00000496255.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": 592,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1779,
          "cdna_start": null,
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          "cdna_length": 4254,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000645793.1"
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 20,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.-129+561A>C",
          "hgvs_p": null,
          "transcript": "ENST00000647540.1",
          "protein_id": "ENSP00000494438.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": 592,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1779,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 3943,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000647540.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 20,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.-129+561A>C",
          "hgvs_p": null,
          "transcript": "ENST00000862515.1",
          "protein_id": "ENSP00000532574.1",
          "transcript_support_level": null,
          "aa_start": null,
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          "aa_length": 592,
          "cds_start": null,
          "cds_end": null,
          "cds_length": 1779,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": 4061,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000862515.1"
        },
        {
          "aa_ref": null,
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          "canonical": false,
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          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
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          "intron_rank": 2,
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          "gene_symbol": "EYA1",
          "gene_hgnc_id": 3519,
          "hgvs_c": "c.-55+561A>C",
          "hgvs_p": null,
          "transcript": "ENST00000862516.1",
          "protein_id": "ENSP00000532575.1",
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          "cdna_start": null,
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        {
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          "consequences": [
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          "gene_symbol": "EYA1",
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          "hgvs_c": "c.-55+561A>C",
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  "message": null
}
For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.