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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 8-84890253-A-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=8&pos=84890253&ref=A&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "8",
"pos": 84890253,
"ref": "A",
"alt": "T",
"effect": "intron_variant",
"transcript": "ENST00000521268.6",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.858+2477A>T",
"hgvs_p": null,
"transcript": "NM_173848.7",
"protein_id": "NP_776247.3",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 291,
"cds_start": -4,
"cds_end": null,
"cds_length": 876,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2983,
"mane_select": "ENST00000521268.6",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.858+2477A>T",
"hgvs_p": null,
"transcript": "ENST00000521268.6",
"protein_id": "ENSP00000430367.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 291,
"cds_start": -4,
"cds_end": null,
"cds_length": 876,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2983,
"mane_select": "NM_173848.7",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.897+2477A>T",
"hgvs_p": null,
"transcript": "ENST00000517638.5",
"protein_id": "ENSP00000430128.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 304,
"cds_start": -4,
"cds_end": null,
"cds_length": 915,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 1972,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.963+2477A>T",
"hgvs_p": null,
"transcript": "NM_001413323.1",
"protein_id": "NP_001400252.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 326,
"cds_start": -4,
"cds_end": null,
"cds_length": 981,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2157,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": 9,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.951+2477A>T",
"hgvs_p": null,
"transcript": "NM_001413301.1",
"protein_id": "NP_001400230.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 322,
"cds_start": -4,
"cds_end": null,
"cds_length": 969,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2085,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.897+2477A>T",
"hgvs_p": null,
"transcript": "NM_001100391.3",
"protein_id": "NP_001093861.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 304,
"cds_start": -4,
"cds_end": null,
"cds_length": 915,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2176,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
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"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 10,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.858+2477A>T",
"hgvs_p": null,
"transcript": "NM_001413309.1",
"protein_id": "NP_001400238.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 303,
"cds_start": -4,
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"cds_length": 912,
"cdna_start": null,
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"cdna_length": 2229,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.894+2477A>T",
"hgvs_p": null,
"transcript": "NM_001413319.1",
"protein_id": "NP_001400248.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 303,
"cds_start": -4,
"cds_end": null,
"cds_length": 912,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2173,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.864+2477A>T",
"hgvs_p": null,
"transcript": "NM_001354321.2",
"protein_id": "NP_001341250.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 293,
"cds_start": -4,
"cds_end": null,
"cds_length": 882,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 2143,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 10,
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"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.858+2477A>T",
"hgvs_p": null,
"transcript": "NM_001100392.3",
"protein_id": "NP_001093862.1",
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"aa_start": null,
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"cds_start": -4,
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"feature": null
},
{
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"protein_coding": true,
"strand": true,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 9,
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"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.858+2477A>T",
"hgvs_p": null,
"transcript": "NM_001100393.3",
"protein_id": "NP_001093863.1",
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},
{
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],
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"gene_symbol": "RALYL",
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},
{
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],
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"gene_symbol": "RALYL",
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],
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"gene_symbol": "RALYL",
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],
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"transcript": "NM_001354316.2",
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},
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],
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"gene_symbol": "RALYL",
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"hgvs_c": "c.858+2477A>T",
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],
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"gene_symbol": "RALYL",
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"hgvs_c": "c.858+2477A>T",
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"transcript": "NM_001354325.2",
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},
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],
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"gene_symbol": "RALYL",
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"hgvs_c": "c.858+2477A>T",
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"transcript": "NM_001413304.1",
"protein_id": "NP_001400233.1",
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},
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],
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"gene_symbol": "RALYL",
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},
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],
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"gene_symbol": "RALYL",
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},
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"consequences": [
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],
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"gene_symbol": "RALYL",
"gene_hgnc_id": 27036,
"hgvs_c": "c.858+2477A>T",
"hgvs_p": null,
"transcript": "NM_001413314.1",
"protein_id": "NP_001400243.1",
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},
{
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"consequences": [
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],
"exon_rank": null,
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"intron_rank": 8,
"intron_rank_end": null,
"gene_symbol": "RALYL",
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"hgvs_c": "c.858+2477A>T",
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