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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 9-27204929-GG-CC (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=9&pos=27204929&ref=GG&alt=CC&genome=hg38&allGenes=true"

API Response

json
{
  "message": null,
  "variants": [
    {
      "acmg_by_gene": [
        {
          "benign_score": 0,
          "criteria": [],
          "effects": [
            "missense_variant"
          ],
          "gene_symbol": "TEK",
          "hgnc_id": 11724,
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "inheritance_mode": "AD",
          "pathogenic_score": 0,
          "score": 0,
          "transcript": "NM_000459.5",
          "verdict": "Uncertain_significance"
        }
      ],
      "acmg_classification": "Uncertain_significance",
      "acmg_criteria": "",
      "acmg_score": 0,
      "allele_count_reference_population": 0,
      "alphamissense_prediction": null,
      "alphamissense_score": null,
      "alt": "CC",
      "apogee2_prediction": null,
      "apogee2_score": null,
      "bayesdelnoaf_prediction": null,
      "bayesdelnoaf_score": null,
      "chr": "9",
      "clinvar_classification": "",
      "clinvar_disease": "",
      "clinvar_review_status": "",
      "clinvar_submissions_summary": "",
      "computational_prediction_selected": null,
      "computational_score_selected": null,
      "computational_source_selected": null,
      "consequences": [
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1124,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4683,
          "cdna_start": 2594,
          "cds_end": null,
          "cds_length": 3375,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_000459.5",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "ENST00000380036.10",
          "protein_coding": true,
          "protein_id": "NP_000450.3",
          "strand": true,
          "transcript": "NM_000459.5",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1124,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": true,
          "cdna_end": null,
          "cdna_length": 4683,
          "cdna_start": 2594,
          "cds_end": null,
          "cds_length": 3375,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000380036.10",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": "NM_000459.5",
          "protein_coding": true,
          "protein_id": "ENSP00000369375.4",
          "strand": true,
          "transcript": "ENST00000380036.10",
          "transcript_support_level": 1
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1137,
          "aa_ref": "G",
          "aa_start": 757,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4697,
          "cdna_start": 2618,
          "cds_end": null,
          "cds_length": 3414,
          "cds_start": 2270,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000923267.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2270_2271delGGinsCC",
          "hgvs_p": "p.Gly757Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000593326.1",
          "strand": true,
          "transcript": "ENST00000923267.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1123,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4455,
          "cdna_start": 2369,
          "cds_end": null,
          "cds_length": 3372,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001375475.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001362404.1",
          "strand": true,
          "transcript": "NM_001375475.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1123,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 6793,
          "cdna_start": 2789,
          "cds_end": null,
          "cds_length": 3372,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856712.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000526771.1",
          "strand": true,
          "transcript": "ENST00000856712.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1122,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4442,
          "cdna_start": 2362,
          "cds_end": null,
          "cds_length": 3369,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000944998.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000615057.1",
          "strand": true,
          "transcript": "ENST00000944998.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1119,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4434,
          "cdna_start": 2369,
          "cds_end": null,
          "cds_length": 3360,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856727.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000526786.1",
          "strand": true,
          "transcript": "ENST00000856727.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1118,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4465,
          "cdna_start": 2403,
          "cds_end": null,
          "cds_length": 3357,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 23,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856720.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000526779.1",
          "strand": true,
          "transcript": "ENST00000856720.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1087,
          "aa_ref": "G",
          "aa_start": 706,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4546,
          "cdna_start": 2465,
          "cds_end": null,
          "cds_length": 3264,
          "cds_start": 2117,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000944996.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2117_2118delGGinsCC",
          "hgvs_p": "p.Gly706Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000615055.1",
          "strand": true,
          "transcript": "ENST00000944996.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1081,
          "aa_ref": "G",
          "aa_start": 700,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4554,
          "cdna_start": 2465,
          "cds_end": null,
          "cds_length": 3246,
          "cds_start": 2099,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001290077.2",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2099_2100delGGinsCC",
          "hgvs_p": "p.Gly700Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001277006.2",
          "strand": true,
          "transcript": "NM_001290077.2",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1081,
          "aa_ref": "G",
          "aa_start": 700,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 3935,
          "cdna_start": 2274,
          "cds_end": null,
          "cds_length": 3246,
          "cds_start": 2099,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000406359.8",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2099_2100delGGinsCC",
          "hgvs_p": "p.Gly700Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000383977.4",
          "strand": true,
          "transcript": "ENST00000406359.8",
          "transcript_support_level": 2
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1081,
          "aa_ref": "G",
          "aa_start": 700,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 5589,
          "cdna_start": 2443,
          "cds_end": null,
          "cds_length": 3246,
          "cds_start": 2099,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000944990.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2099_2100delGGinsCC",
          "hgvs_p": "p.Gly700Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000615049.1",
          "strand": true,
          "transcript": "ENST00000944990.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1080,
          "aa_ref": "G",
          "aa_start": 700,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4326,
          "cdna_start": 2240,
          "cds_end": null,
          "cds_length": 3243,
          "cds_start": 2099,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "NM_001375476.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2099_2100delGGinsCC",
          "hgvs_p": "p.Gly700Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "NP_001362405.1",
          "strand": true,
          "transcript": "NM_001375476.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1080,
          "aa_ref": "G",
          "aa_start": 700,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4662,
          "cdna_start": 2576,
          "cds_end": null,
          "cds_length": 3243,
          "cds_start": 2099,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856713.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2099_2100delGGinsCC",
          "hgvs_p": "p.Gly700Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000526772.1",
          "strand": true,
          "transcript": "ENST00000856713.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1080,
          "aa_ref": "G",
          "aa_start": 700,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4533,
          "cdna_start": 2447,
          "cds_end": null,
          "cds_length": 3243,
          "cds_start": 2099,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856716.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2099_2100delGGinsCC",
          "hgvs_p": "p.Gly700Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000526775.1",
          "strand": true,
          "transcript": "ENST00000856716.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1078,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4491,
          "cdna_start": 2542,
          "cds_end": null,
          "cds_length": 3237,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856717.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000526776.1",
          "strand": true,
          "transcript": "ENST00000856717.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1078,
          "aa_ref": "G",
          "aa_start": 698,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4342,
          "cdna_start": 2258,
          "cds_end": null,
          "cds_length": 3237,
          "cds_start": 2093,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000944997.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2093_2094delGGinsCC",
          "hgvs_p": "p.Gly698Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000615056.1",
          "strand": true,
          "transcript": "ENST00000944997.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1077,
          "aa_ref": "G",
          "aa_start": 743,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4561,
          "cdna_start": 2613,
          "cds_end": null,
          "cds_length": 3234,
          "cds_start": 2228,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 21,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856715.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2228_2229delGGinsCC",
          "hgvs_p": "p.Gly743Ala",
          "intron_rank": null,
          "intron_rank_end": null,
          "mane_plus": null,
          "mane_select": null,
          "protein_coding": true,
          "protein_id": "ENSP00000526774.1",
          "strand": true,
          "transcript": "ENST00000856715.1",
          "transcript_support_level": null
        },
        {
          "aa_alt": "A",
          "aa_end": null,
          "aa_length": 1073,
          "aa_ref": "G",
          "aa_start": 692,
          "biotype": "protein_coding",
          "canonical": false,
          "cdna_end": null,
          "cdna_length": 4320,
          "cdna_start": 2238,
          "cds_end": null,
          "cds_length": 3222,
          "cds_start": 2075,
          "consequences": [
            "missense_variant"
          ],
          "exon_count": 22,
          "exon_rank": null,
          "exon_rank_end": null,
          "feature": "ENST00000856723.1",
          "gene_hgnc_id": 11724,
          "gene_symbol": "TEK",
          "hgvs_c": "c.2075_2076delGGinsCC",
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For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.