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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: 9-32974572-GAA-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=9&pos=32974572&ref=GAA&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "9",
"pos": 32974572,
"ref": "GAA",
"alt": "G",
"effect": "intron_variant",
"transcript": "NM_175073.3",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "NM_001195248.2",
"protein_id": "NP_001182177.2",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 342,
"cds_start": null,
"cds_end": null,
"cds_length": 1029,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "ENST00000379817.7",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001195248.2"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "ENST00000379817.7",
"protein_id": "ENSP00000369145.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 342,
"cds_start": null,
"cds_end": null,
"cds_length": 1029,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": "NM_001195248.2",
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000379817.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "ENST00000379819.6",
"protein_id": "ENSP00000369147.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 342,
"cds_start": null,
"cds_end": null,
"cds_length": 1029,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000379819.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "ENST00000463596.6",
"protein_id": "ENSP00000419846.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 342,
"cds_start": null,
"cds_end": null,
"cds_length": 1029,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000463596.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "ENST00000468275.6",
"protein_id": "ENSP00000420263.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 292,
"cds_start": null,
"cds_end": null,
"cds_length": 879,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000468275.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.609-13_609-12delTT",
"hgvs_p": null,
"transcript": "ENST00000309615.8",
"protein_id": "ENSP00000311547.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 288,
"cds_start": null,
"cds_end": null,
"cds_length": 867,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000309615.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.609-13_609-12delTT",
"hgvs_p": null,
"transcript": "ENST00000436040.7",
"protein_id": "ENSP00000400806.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 288,
"cds_start": null,
"cds_end": null,
"cds_length": 867,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000436040.7"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.609-13_609-12delTT",
"hgvs_p": null,
"transcript": "ENST00000476858.6",
"protein_id": "ENSP00000419042.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 288,
"cds_start": null,
"cds_end": null,
"cds_length": 867,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000476858.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.555-13_555-12delTT",
"hgvs_p": null,
"transcript": "ENST00000397172.8",
"protein_id": "ENSP00000380357.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 270,
"cds_start": null,
"cds_end": null,
"cds_length": 813,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "ENST00000397172.8"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*389-13_*389-12delTT",
"hgvs_p": null,
"transcript": "ENST00000460940.6",
"protein_id": "ENSP00000418311.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
"cds_end": null,
"cds_length": null,
"cdna_start": null,
"cdna_end": null,
"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000460940.6"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 9,
"intron_rank": 7,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*501-13_*501-12delTT",
"hgvs_p": null,
"transcript": "ENST00000465003.6",
"protein_id": "ENSP00000419430.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": null,
"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000465003.6"
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*616-13_*616-12delTT",
"hgvs_p": null,
"transcript": "ENST00000467331.6",
"protein_id": "ENSP00000418733.1",
"transcript_support_level": 1,
"aa_start": null,
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"aa_length": null,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000467331.6"
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*565-13_*565-12delTT",
"hgvs_p": null,
"transcript": "ENST00000472896.6",
"protein_id": "ENSP00000417804.2",
"transcript_support_level": 1,
"aa_start": null,
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"aa_length": null,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000472896.6"
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 9,
"intron_rank": 7,
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"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*616-13_*616-12delTT",
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"transcript": "ENST00000479656.6",
"protein_id": "ENSP00000420071.1",
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"biotype": "nonsense_mediated_decay",
"feature": "ENST00000479656.6"
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 7,
"intron_rank": 5,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*389-13_*389-12delTT",
"hgvs_p": null,
"transcript": "ENST00000482687.6",
"protein_id": "ENSP00000419289.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000482687.6"
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*398-13_*398-12delTT",
"hgvs_p": null,
"transcript": "ENST00000483148.6",
"protein_id": "ENSP00000419723.1",
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"mane_select": null,
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"biotype": "nonsense_mediated_decay",
"feature": "ENST00000483148.6"
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*492-13_*492-12delTT",
"hgvs_p": null,
"transcript": "ENST00000485479.6",
"protein_id": "ENSP00000418144.1",
"transcript_support_level": 1,
"aa_start": null,
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"aa_length": null,
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"cdna_start": null,
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"mane_plus": null,
"biotype": "nonsense_mediated_decay",
"feature": "ENST00000485479.6"
},
{
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"canonical": false,
"protein_coding": false,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "n.*616-13_*616-12delTT",
"hgvs_p": null,
"transcript": "ENST00000494649.5",
"protein_id": "ENSP00000417634.1",
"transcript_support_level": 1,
"aa_start": null,
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"aa_length": null,
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"mane_select": null,
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"biotype": "nonsense_mediated_decay",
"feature": "ENST00000494649.5"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "NM_001195249.2",
"protein_id": "NP_001182178.1",
"transcript_support_level": null,
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"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001195249.2"
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "NM_001368995.1",
"protein_id": "NP_001355924.1",
"transcript_support_level": null,
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"biotype": "protein_coding",
"feature": "NM_001368995.1"
},
{
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"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "NM_001368996.1",
"protein_id": "NP_001355925.1",
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"aa_start": null,
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"aa_length": 342,
"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001368996.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 8,
"intron_rank": 6,
"intron_rank_end": null,
"gene_symbol": "APTX",
"gene_hgnc_id": 15984,
"hgvs_c": "c.771-13_771-12delTT",
"hgvs_p": null,
"transcript": "NM_001368997.1",
"protein_id": "NP_001355926.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
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"cds_start": null,
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"cdna_start": null,
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"cdna_length": null,
"mane_select": null,
"mane_plus": null,
"biotype": "protein_coding",
"feature": "NM_001368997.1"
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
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