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GeneBe API Showcase

This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.

API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.

Documentation & Advanced Usage

Complete API documentation:docs.genebe.net/docs/api/overview/

Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/

Python client for pandas:pypi.org/project/genebe/

Java CLI for VCF files:github.com/pstawinski/genebe-cli

All tools documented at:docs.genebe.net

API Request Examples for Variant: 9-3932370-G-C (hg38)

Bash / cURL Example

bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=9&pos=3932370&ref=G&alt=C&genome=hg38&allGenes=true"

API Response

json
{
  "variants": [
    {
      "chr": "9",
      "pos": 3932370,
      "ref": "G",
      "alt": "C",
      "effect": "missense_variant",
      "transcript": "NM_001042413.2",
      "consequences": [
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1973C>G",
          "hgvs_p": "p.Ala658Gly",
          "transcript": "NM_001042413.2",
          "protein_id": "NP_001035878.1",
          "transcript_support_level": null,
          "aa_start": 658,
          "aa_end": null,
          "aa_length": 930,
          "cds_start": 1973,
          "cds_end": null,
          "cds_length": 2793,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "ENST00000381971.8",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001042413.2"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": true,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1973C>G",
          "hgvs_p": "p.Ala658Gly",
          "transcript": "ENST00000381971.8",
          "protein_id": "ENSP00000371398.3",
          "transcript_support_level": 5,
          "aa_start": 658,
          "aa_end": null,
          "aa_length": 930,
          "cds_start": 1973,
          "cds_end": null,
          "cds_length": 2793,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": "NM_001042413.2",
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000381971.8"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1508C>G",
          "hgvs_p": "p.Ala503Gly",
          "transcript": "ENST00000324333.14",
          "protein_id": "ENSP00000325494.10",
          "transcript_support_level": 1,
          "aa_start": 503,
          "aa_end": null,
          "aa_length": 775,
          "cds_start": 1508,
          "cds_end": null,
          "cds_length": 2328,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000324333.14"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 6,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.513C>G",
          "hgvs_p": null,
          "transcript": "ENST00000467497.6",
          "protein_id": null,
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000467497.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.*1336C>G",
          "hgvs_p": null,
          "transcript": "ENST00000491889.6",
          "protein_id": "ENSP00000419914.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000491889.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "3_prime_UTR_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.*1336C>G",
          "hgvs_p": null,
          "transcript": "ENST00000491889.6",
          "protein_id": "ENSP00000419914.1",
          "transcript_support_level": 1,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000491889.6"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1973C>G",
          "hgvs_p": "p.Ala658Gly",
          "transcript": "NM_001438906.1",
          "protein_id": "NP_001425835.1",
          "transcript_support_level": null,
          "aa_start": 658,
          "aa_end": null,
          "aa_length": 930,
          "cds_start": 1973,
          "cds_end": null,
          "cds_length": 2793,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001438906.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1973C>G",
          "hgvs_p": "p.Ala658Gly",
          "transcript": "NM_001438907.1",
          "protein_id": "NP_001425836.1",
          "transcript_support_level": null,
          "aa_start": 658,
          "aa_end": null,
          "aa_length": 930,
          "cds_start": 1973,
          "cds_end": null,
          "cds_length": 2793,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001438907.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1973C>G",
          "hgvs_p": "p.Ala658Gly",
          "transcript": "NM_001438908.1",
          "protein_id": "NP_001425837.1",
          "transcript_support_level": null,
          "aa_start": 658,
          "aa_end": null,
          "aa_length": 930,
          "cds_start": 1973,
          "cds_end": null,
          "cds_length": 2793,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001438908.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1508C>G",
          "hgvs_p": "p.Ala503Gly",
          "transcript": "NM_001438909.1",
          "protein_id": "NP_001425838.1",
          "transcript_support_level": null,
          "aa_start": 503,
          "aa_end": null,
          "aa_length": 775,
          "cds_start": 1508,
          "cds_end": null,
          "cds_length": 2328,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001438909.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1508C>G",
          "hgvs_p": "p.Ala503Gly",
          "transcript": "NM_152629.4",
          "protein_id": "NP_689842.3",
          "transcript_support_level": null,
          "aa_start": 503,
          "aa_end": null,
          "aa_length": 775,
          "cds_start": 1508,
          "cds_end": null,
          "cds_length": 2328,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_152629.4"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1508C>G",
          "hgvs_p": "p.Ala503Gly",
          "transcript": "ENST00000682749.1",
          "protein_id": "ENSP00000507306.1",
          "transcript_support_level": null,
          "aa_start": 503,
          "aa_end": null,
          "aa_length": 775,
          "cds_start": 1508,
          "cds_end": null,
          "cds_length": 2328,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "ENST00000682749.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1307C>G",
          "hgvs_p": "p.Ala436Gly",
          "transcript": "NM_001438911.1",
          "protein_id": "NP_001425840.1",
          "transcript_support_level": null,
          "aa_start": 436,
          "aa_end": null,
          "aa_length": 708,
          "cds_start": 1307,
          "cds_end": null,
          "cds_length": 2127,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001438911.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1307C>G",
          "hgvs_p": "p.Ala436Gly",
          "transcript": "NM_001438912.1",
          "protein_id": "NP_001425841.1",
          "transcript_support_level": null,
          "aa_start": 436,
          "aa_end": null,
          "aa_length": 708,
          "cds_start": 1307,
          "cds_end": null,
          "cds_length": 2127,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "NM_001438912.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 6,
          "exon_rank_end": null,
          "exon_count": 11,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1973C>G",
          "hgvs_p": "p.Ala658Gly",
          "transcript": "XM_011517763.3",
          "protein_id": "XP_011516065.1",
          "transcript_support_level": null,
          "aa_start": 658,
          "aa_end": null,
          "aa_length": 930,
          "cds_start": 1973,
          "cds_end": null,
          "cds_length": 2793,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011517763.3"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 7,
          "exon_rank_end": null,
          "exon_count": 12,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1718C>G",
          "hgvs_p": "p.Ala573Gly",
          "transcript": "XM_047422890.1",
          "protein_id": "XP_047278846.1",
          "transcript_support_level": null,
          "aa_start": 573,
          "aa_end": null,
          "aa_length": 845,
          "cds_start": 1718,
          "cds_end": null,
          "cds_length": 2538,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_047422890.1"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1508C>G",
          "hgvs_p": "p.Ala503Gly",
          "transcript": "XM_011517766.3",
          "protein_id": "XP_011516068.1",
          "transcript_support_level": null,
          "aa_start": 503,
          "aa_end": null,
          "aa_length": 775,
          "cds_start": 1508,
          "cds_end": null,
          "cds_length": 2328,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_011517766.3"
        },
        {
          "aa_ref": "A",
          "aa_alt": "G",
          "canonical": false,
          "protein_coding": true,
          "strand": false,
          "consequences": [
            "missense_variant"
          ],
          "exon_rank": 5,
          "exon_rank_end": null,
          "exon_count": 10,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "c.1508C>G",
          "hgvs_p": "p.Ala503Gly",
          "transcript": "XM_017014361.2",
          "protein_id": "XP_016869850.1",
          "transcript_support_level": null,
          "aa_start": 503,
          "aa_end": null,
          "aa_length": 775,
          "cds_start": 1508,
          "cds_end": null,
          "cds_length": 2328,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "protein_coding",
          "feature": "XM_017014361.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 3,
          "exon_rank_end": null,
          "exon_count": 8,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.329C>G",
          "hgvs_p": null,
          "transcript": "ENST00000461870.5",
          "protein_id": null,
          "transcript_support_level": 2,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000461870.5"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 2,
          "exon_rank_end": null,
          "exon_count": 3,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.263C>G",
          "hgvs_p": null,
          "transcript": "ENST00000463680.6",
          "protein_id": null,
          "transcript_support_level": 5,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "retained_intron",
          "feature": "ENST00000463680.6"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 7,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.531C>G",
          "hgvs_p": null,
          "transcript": "ENST00000464391.2",
          "protein_id": null,
          "transcript_support_level": 3,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000464391.2"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.415C>G",
          "hgvs_p": null,
          "transcript": "ENST00000645252.2",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000645252.2"
        },
        {
          "aa_ref": null,
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          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "non_coding_transcript_exon_variant"
          ],
          "exon_rank": 4,
          "exon_rank_end": null,
          "exon_count": 9,
          "intron_rank": null,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.472C>G",
          "hgvs_p": null,
          "transcript": "ENST00000682864.1",
          "protein_id": null,
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "pseudogene",
          "feature": "ENST00000682864.1"
        },
        {
          "aa_ref": null,
          "aa_alt": null,
          "canonical": false,
          "protein_coding": false,
          "strand": false,
          "consequences": [
            "intron_variant"
          ],
          "exon_rank": null,
          "exon_rank_end": null,
          "exon_count": 4,
          "intron_rank": 2,
          "intron_rank_end": null,
          "gene_symbol": "GLIS3",
          "gene_hgnc_id": 28510,
          "hgvs_c": "n.132-102878C>G",
          "hgvs_p": null,
          "transcript": "ENST00000682846.1",
          "protein_id": "ENSP00000507527.1",
          "transcript_support_level": null,
          "aa_start": null,
          "aa_end": null,
          "aa_length": null,
          "cds_start": null,
          "cds_end": null,
          "cds_length": null,
          "cdna_start": null,
          "cdna_end": null,
          "cdna_length": null,
          "mane_select": null,
          "mane_plus": null,
          "biotype": "nonsense_mediated_decay",
          "feature": "ENST00000682846.1"
        }
      ],
      "gene_symbol": "GLIS3",
      "gene_hgnc_id": 28510,
      "dbsnp": "rs977500969",
      "frequency_reference_population": 0.000002481947,
      "hom_count_reference_population": 0,
      "allele_count_reference_population": 4,
      "gnomad_exomes_af": 0.0000020552,
      "gnomad_genomes_af": 0.00000658207,
      "gnomad_exomes_ac": 3,
      "gnomad_genomes_ac": 1,
      "gnomad_exomes_homalt": 0,
      "gnomad_genomes_homalt": 0,
      "gnomad_mito_homoplasmic": null,
      "gnomad_mito_heteroplasmic": null,
      "computational_score_selected": 0.23424765467643738,
      "computational_prediction_selected": "Benign",
      "computational_source_selected": "MetaRNN",
      "splice_score_selected": 0,
      "splice_prediction_selected": "Benign",
      "splice_source_selected": "max_spliceai",
      "revel_score": 0.039,
      "revel_prediction": "Benign",
      "alphamissense_score": 0.2125,
      "alphamissense_prediction": null,
      "bayesdelnoaf_score": -0.51,
      "bayesdelnoaf_prediction": "Benign",
      "phylop100way_score": 2.27,
      "phylop100way_prediction": "Benign",
      "spliceai_max_score": 0,
      "spliceai_max_prediction": "Benign",
      "dbscsnv_ada_score": null,
      "dbscsnv_ada_prediction": null,
      "apogee2_score": null,
      "apogee2_prediction": null,
      "mitotip_score": null,
      "mitotip_prediction": null,
      "acmg_score": -1,
      "acmg_classification": "Likely_benign",
      "acmg_criteria": "PM2,BP4_Moderate,BP6",
      "acmg_by_gene": [
        {
          "score": -1,
          "benign_score": 3,
          "pathogenic_score": 2,
          "criteria": [
            "PM2",
            "BP4_Moderate",
            "BP6"
          ],
          "verdict": "Likely_benign",
          "transcript": "NM_001042413.2",
          "gene_symbol": "GLIS3",
          "hgnc_id": 28510,
          "effects": [
            "missense_variant"
          ],
          "inheritance_mode": "AR,Unknown",
          "hgvs_c": "c.1973C>G",
          "hgvs_p": "p.Ala658Gly"
        }
      ],
      "clinvar_disease": "Inborn genetic diseases,Monogenic diabetes,Neonatal diabetes mellitus with congenital hypothyroidism",
      "clinvar_classification": "Conflicting classifications of pathogenicity",
      "clinvar_review_status": "criteria provided, conflicting classifications",
      "clinvar_submissions_summary": "US:2 LB:1",
      "phenotype_combined": "Monogenic diabetes|Inborn genetic diseases|Neonatal diabetes mellitus with congenital hypothyroidism",
      "pathogenicity_classification_combined": "Conflicting classifications of pathogenicity",
      "custom_annotations": null
    }
  ],
  "message": null
}