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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: Y-13303235-A-T (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=Y&pos=13303235&ref=A&alt=T&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "Y",
"pos": 13303235,
"ref": "A",
"alt": "T",
"effect": "intron_variant",
"transcript": "ENST00000545955.6",
"consequences": [
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": 24,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3566-244T>A",
"hgvs_p": null,
"transcript": "NM_001258249.2",
"protein_id": "NP_001245178.1",
"transcript_support_level": null,
"aa_start": null,
"aa_end": null,
"aa_length": 1444,
"cds_start": -4,
"cds_end": null,
"cds_length": 4335,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6174,
"mane_select": "ENST00000545955.6",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": 24,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3566-244T>A",
"hgvs_p": null,
"transcript": "ENST00000545955.6",
"protein_id": "ENSP00000442047.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1444,
"cds_start": -4,
"cds_end": null,
"cds_length": 4335,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6174,
"mane_select": "NM_001258249.2",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": 24,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3500-244T>A",
"hgvs_p": null,
"transcript": "ENST00000382896.9",
"protein_id": "ENSP00000372352.5",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1422,
"cds_start": -4,
"cds_end": null,
"cds_length": 4269,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 5239,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 23,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3431-244T>A",
"hgvs_p": null,
"transcript": "ENST00000617789.5",
"protein_id": "ENSP00000483735.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1399,
"cds_start": -4,
"cds_end": null,
"cds_length": 4200,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4200,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 23,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3401-244T>A",
"hgvs_p": null,
"transcript": "ENST00000540140.6",
"protein_id": "ENSP00000441943.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1389,
"cds_start": -4,
"cds_end": null,
"cds_length": 4170,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4170,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 22,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3335-244T>A",
"hgvs_p": null,
"transcript": "ENST00000612274.5",
"protein_id": "ENSP00000485013.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1367,
"cds_start": -4,
"cds_end": null,
"cds_length": 4104,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4104,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": 23,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3323-244T>A",
"hgvs_p": null,
"transcript": "ENST00000538878.6",
"protein_id": "ENSP00000445274.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1363,
"cds_start": -4,
"cds_end": null,
"cds_length": 4092,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4092,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 22,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3275-244T>A",
"hgvs_p": null,
"transcript": "ENST00000331397.8",
"protein_id": "ENSP00000328939.4",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1347,
"cds_start": -4,
"cds_end": null,
"cds_length": 4044,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 6529,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": null,
"aa_alt": null,
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": 23,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3410-244T>A",
"hgvs_p": null,
"transcript": "ENST00000537580.6",
"protein_id": "ENSP00000439922.2",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1335,
"cds_start": -4,
"cds_end": null,
"cds_length": 4008,
"cdna_start": null,
"cdna_end": null,
"cdna_length": 4008,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": 18,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3026-244T>A",
"hgvs_p": null,
"transcript": "ENST00000618474.5",
"protein_id": "ENSP00000484698.1",
"transcript_support_level": 1,
"aa_start": null,
"aa_end": null,
"aa_length": 1264,
"cds_start": -4,
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"cdna_start": null,
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"mane_select": null,
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"biotype": null,
"feature": null
},
{
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"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"intron_variant"
],
"exon_rank": null,
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"exon_count": 25,
"intron_rank": 22,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.3275-244T>A",
"hgvs_p": null,
"transcript": "ENST00000362096.8",
"protein_id": "ENSP00000355420.4",
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},
{
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"consequences": [
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],
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"gene_symbol": "UTY",
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"transcript": "ENST00000624098.3",
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},
{
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],
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"gene_symbol": "UTY",
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"hgvs_c": "c.3410-244T>A",
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"transcript": "NM_001400170.1",
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},
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],
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"gene_symbol": "UTY",
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"hgvs_c": "c.3365-244T>A",
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},
{
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],
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"transcript": "NM_001419806.1",
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},
{
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],
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"gene_symbol": "UTY",
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"hgvs_c": "c.3275-244T>A",
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],
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"gene_symbol": "UTY",
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"hgvs_c": "c.3500-244T>A",
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},
{
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],
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"gene_symbol": "UTY",
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"hgvs_c": "c.3500-244T>A",
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"transcript": "NM_001400177.1",
"protein_id": "NP_001387106.1",
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},
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],
"exon_rank": null,
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"gene_symbol": "UTY",
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"hgvs_c": "c.3431-244T>A",
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"transcript": "NM_001258258.1",
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},
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],
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},
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"consequences": [
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],
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"hgvs_c": "c.3401-244T>A",
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"transcript": "NM_001258261.1",
"protein_id": "NP_001245190.1",
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},
{
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],
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"intron_rank": 23,
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"gene_symbol": "UTY",
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"hgvs_c": "c.3410-244T>A",
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"transcript": "NM_001400178.1",
"protein_id": "NP_001387107.1",
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}