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GeneBe API Showcase
This page demonstrates how to use the GeneBe API to query variant information. The API provides programmatic access to genomic annotations and variant data.
API presented here should be used for checking single variants. If you want to check many variants at once, please use other API endpoints that you will find in the documentation.
Documentation & Advanced Usage
• Complete API documentation:docs.genebe.net/docs/api/overview/
• Interactive endpoint tester:api.genebe.net/cloud/gb-api-doc/swagger-ui/
• Python client for pandas:pypi.org/project/genebe/
• Java CLI for VCF files:github.com/pstawinski/genebe-cli
• All tools documented at:docs.genebe.net
API Request Examples for Variant: Y-13355944-A-G (hg38)
Bash / cURL Example
bash
curl "https://api.genebe.net/cloud/api-public/v1/variant?chr=Y&pos=13355944&ref=A&alt=G&genome=hg38&allGenes=true"API Response
json
{
"variants": [
{
"chr": "Y",
"pos": 13355944,
"ref": "A",
"alt": "G",
"effect": "synonymous_variant",
"transcript": "ENST00000545955.6",
"consequences": [
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1644T>C",
"hgvs_p": "p.Ser548Ser",
"transcript": "NM_001258249.2",
"protein_id": "NP_001245178.1",
"transcript_support_level": null,
"aa_start": 548,
"aa_end": null,
"aa_length": 1444,
"cds_start": 1644,
"cds_end": null,
"cds_length": 4335,
"cdna_start": 2012,
"cdna_end": null,
"cdna_length": 6174,
"mane_select": "ENST00000545955.6",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": true,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1644T>C",
"hgvs_p": "p.Ser548Ser",
"transcript": "ENST00000545955.6",
"protein_id": "ENSP00000442047.2",
"transcript_support_level": 1,
"aa_start": 548,
"aa_end": null,
"aa_length": 1444,
"cds_start": 1644,
"cds_end": null,
"cds_length": 4335,
"cdna_start": 2012,
"cdna_end": null,
"cdna_length": 6174,
"mane_select": "NM_001258249.2",
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1578T>C",
"hgvs_p": "p.Ser526Ser",
"transcript": "ENST00000382896.9",
"protein_id": "ENSP00000372352.5",
"transcript_support_level": 1,
"aa_start": 526,
"aa_end": null,
"aa_length": 1422,
"cds_start": 1578,
"cds_end": null,
"cds_length": 4269,
"cdna_start": 1904,
"cdna_end": null,
"cdna_length": 5239,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1509T>C",
"hgvs_p": "p.Ser503Ser",
"transcript": "ENST00000617789.5",
"protein_id": "ENSP00000483735.1",
"transcript_support_level": 1,
"aa_start": 503,
"aa_end": null,
"aa_length": 1399,
"cds_start": 1509,
"cds_end": null,
"cds_length": 4200,
"cdna_start": 1509,
"cdna_end": null,
"cdna_length": 4200,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1479T>C",
"hgvs_p": "p.Ser493Ser",
"transcript": "ENST00000540140.6",
"protein_id": "ENSP00000441943.2",
"transcript_support_level": 1,
"aa_start": 493,
"aa_end": null,
"aa_length": 1389,
"cds_start": 1479,
"cds_end": null,
"cds_length": 4170,
"cdna_start": 1479,
"cdna_end": null,
"cdna_length": 4170,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1488T>C",
"hgvs_p": "p.Ser496Ser",
"transcript": "ENST00000612274.5",
"protein_id": "ENSP00000485013.1",
"transcript_support_level": 1,
"aa_start": 496,
"aa_end": null,
"aa_length": 1367,
"cds_start": 1488,
"cds_end": null,
"cds_length": 4104,
"cdna_start": 1488,
"cdna_end": null,
"cdna_length": 4104,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1353T>C",
"hgvs_p": "p.Ser451Ser",
"transcript": "ENST00000538878.6",
"protein_id": "ENSP00000445274.2",
"transcript_support_level": 1,
"aa_start": 451,
"aa_end": null,
"aa_length": 1363,
"cds_start": 1353,
"cds_end": null,
"cds_length": 4092,
"cdna_start": 1353,
"cdna_end": null,
"cdna_length": 4092,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1353T>C",
"hgvs_p": "p.Ser451Ser",
"transcript": "ENST00000331397.8",
"protein_id": "ENSP00000328939.4",
"transcript_support_level": 1,
"aa_start": 451,
"aa_end": null,
"aa_length": 1347,
"cds_start": 1353,
"cds_end": null,
"cds_length": 4044,
"cdna_start": 2361,
"cdna_end": null,
"cdna_length": 6529,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1488T>C",
"hgvs_p": "p.Ser496Ser",
"transcript": "ENST00000537580.6",
"protein_id": "ENSP00000439922.2",
"transcript_support_level": 1,
"aa_start": 496,
"aa_end": null,
"aa_length": 1335,
"cds_start": 1488,
"cds_end": null,
"cds_length": 4008,
"cdna_start": 1488,
"cdna_end": null,
"cdna_length": 4008,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 10,
"exon_rank_end": null,
"exon_count": 24,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1104T>C",
"hgvs_p": "p.Ser368Ser",
"transcript": "ENST00000618474.5",
"protein_id": "ENSP00000484698.1",
"transcript_support_level": 1,
"aa_start": 368,
"aa_end": null,
"aa_length": 1264,
"cds_start": 1104,
"cds_end": null,
"cds_length": 3795,
"cdna_start": 1104,
"cdna_end": null,
"cdna_length": 3795,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 25,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1353T>C",
"hgvs_p": "p.Ser451Ser",
"transcript": "ENST00000362096.8",
"protein_id": "ENSP00000355420.4",
"transcript_support_level": 1,
"aa_start": 451,
"aa_end": null,
"aa_length": 1240,
"cds_start": 1353,
"cds_end": null,
"cds_length": 3723,
"cdna_start": 2358,
"cdna_end": null,
"cdna_length": 4990,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1488T>C",
"hgvs_p": "p.Ser496Ser",
"transcript": "ENST00000624098.3",
"protein_id": "ENSP00000485539.2",
"transcript_support_level": 1,
"aa_start": 496,
"aa_end": null,
"aa_length": 1211,
"cds_start": 1488,
"cds_end": null,
"cds_length": 3636,
"cdna_start": 1488,
"cdna_end": null,
"cdna_length": 3636,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 20,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1353T>C",
"hgvs_p": "p.Ser451Ser",
"transcript": "ENST00000329134.9",
"protein_id": "ENSP00000330446.5",
"transcript_support_level": 1,
"aa_start": 451,
"aa_end": null,
"aa_length": 1079,
"cds_start": 1353,
"cds_end": null,
"cds_length": 3240,
"cdna_start": 2358,
"cdna_end": null,
"cdna_length": 4325,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1488T>C",
"hgvs_p": "p.Ser496Ser",
"transcript": "NM_001400170.1",
"protein_id": "NP_001387099.1",
"transcript_support_level": null,
"aa_start": 496,
"aa_end": null,
"aa_length": 1530,
"cds_start": 1488,
"cds_end": null,
"cds_length": 4593,
"cdna_start": 1856,
"cdna_end": null,
"cdna_length": 5452,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1443T>C",
"hgvs_p": "p.Ser481Ser",
"transcript": "NM_001400171.1",
"protein_id": "NP_001387100.1",
"transcript_support_level": null,
"aa_start": 481,
"aa_end": null,
"aa_length": 1515,
"cds_start": 1443,
"cds_end": null,
"cds_length": 4548,
"cdna_start": 1811,
"cdna_end": null,
"cdna_length": 5407,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1353T>C",
"hgvs_p": "p.Ser451Ser",
"transcript": "NM_001419806.1",
"protein_id": "NP_001406735.1",
"transcript_support_level": null,
"aa_start": 451,
"aa_end": null,
"aa_length": 1501,
"cds_start": 1353,
"cds_end": null,
"cds_length": 4506,
"cdna_start": 1721,
"cdna_end": null,
"cdna_length": 5365,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 14,
"exon_rank_end": null,
"exon_count": 28,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1353T>C",
"hgvs_p": "p.Ser451Ser",
"transcript": "NM_001400173.1",
"protein_id": "NP_001387102.1",
"transcript_support_level": null,
"aa_start": 451,
"aa_end": null,
"aa_length": 1485,
"cds_start": 1353,
"cds_end": null,
"cds_length": 4458,
"cdna_start": 1721,
"cdna_end": null,
"cdna_length": 5317,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1578T>C",
"hgvs_p": "p.Ser526Ser",
"transcript": "NM_001400175.1",
"protein_id": "NP_001387104.1",
"transcript_support_level": null,
"aa_start": 526,
"aa_end": null,
"aa_length": 1422,
"cds_start": 1578,
"cds_end": null,
"cds_length": 4269,
"cdna_start": 1946,
"cdna_end": null,
"cdna_length": 6038,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 16,
"exon_rank_end": null,
"exon_count": 30,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1578T>C",
"hgvs_p": "p.Ser526Ser",
"transcript": "NM_001400177.1",
"protein_id": "NP_001387106.1",
"transcript_support_level": null,
"aa_start": 526,
"aa_end": null,
"aa_length": 1422,
"cds_start": 1578,
"cds_end": null,
"cds_length": 4269,
"cdna_start": 1946,
"cdna_end": null,
"cdna_length": 6108,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1509T>C",
"hgvs_p": "p.Ser503Ser",
"transcript": "NM_001258258.1",
"protein_id": "NP_001245187.1",
"transcript_support_level": null,
"aa_start": 503,
"aa_end": null,
"aa_length": 1399,
"cds_start": 1509,
"cds_end": null,
"cds_length": 4200,
"cdna_start": 2514,
"cdna_end": null,
"cdna_length": 6682,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1488T>C",
"hgvs_p": "p.Ser496Ser",
"transcript": "NM_001258252.1",
"protein_id": "NP_001245181.1",
"transcript_support_level": null,
"aa_start": 496,
"aa_end": null,
"aa_length": 1392,
"cds_start": 1488,
"cds_end": null,
"cds_length": 4179,
"cdna_start": 2493,
"cdna_end": null,
"cdna_length": 6661,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1488T>C",
"hgvs_p": "p.Ser496Ser",
"transcript": "ENST00000682913.1",
"protein_id": "ENSP00000507736.1",
"transcript_support_level": null,
"aa_start": 496,
"aa_end": null,
"aa_length": 1392,
"cds_start": 1488,
"cds_end": null,
"cds_length": 4179,
"cdna_start": 1488,
"cdna_end": null,
"cdna_length": 4179,
"mane_select": null,
"mane_plus": null,
"biotype": null,
"feature": null
},
{
"aa_ref": "S",
"aa_alt": "S",
"canonical": false,
"protein_coding": true,
"strand": false,
"consequences": [
"synonymous_variant"
],
"exon_rank": 15,
"exon_rank_end": null,
"exon_count": 29,
"intron_rank": null,
"intron_rank_end": null,
"gene_symbol": "UTY",
"gene_hgnc_id": 12638,
"hgvs_c": "c.1479T>C",
"hgvs_p": "p.Ser493Ser",
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