APOA1-AS

Gene

APOA1 antisense RNA, the group of Antisense RNAs

Gene summary

No gene description available in the current model. Review primary literature for detailed gene function and characteristics.

MANE transcript

N/A

Inheritance

—

ClinVar variants

U:2B:1

Top phenotype

Cardiovascular phenotype

Max pathogenic AF

—

Genomic locus

chr11:116,836,117-116,856,210

External References & Databases

Ensembl (ENSG00000235910)

NCBI Gene (104326055)

GenCC Phenotypes & Disease Associations

Curated gene-disease validity assertions and inheritance patterns

No GenCC data available for this gene.

ClinVar Associated Diseases & Phenotypes

Reported disease conditions connected to APOA1-AS variants in ClinVar

27 Conditions Cataloged

not providedTotal: 101

Cardiovascular phenotypeTotal: 59

Familial visceral amyloidosis, Ostertag typeTotal: 21

not specifiedTotal: 14

Hypoalphalipoproteinemia, primary, 1Total: 14

Inborn genetic diseasesTotal: 8

Hypoalphalipoproteinemia, primary, 2Total: 6

Hypoalphalipoproteinemia, primary, 2, intermediateTotal: 4

ClinVar Variants & Pathogenicity by Type

Statistics based on transcript . Only rare variants are included.

We include only reliable ClinVar variants with their consequences to MANE Select, MANE Plus Clinical transcripts, or transcripts with TSL equal to 1. Click a count to filter the variants table below.

Slight differences between displayed counts and ClinVar may occur due to a different transcript/consequence chosen by our variant effect predictor, or because we classify Benign/Likely benign as Likely benign and Pathogenic/Likely pathogenic as Likely pathogenic.

Effect	PathogenicP	Likely pathogenicLP	VUS	Likely benignLB	BenignB	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
splice donor/acceptor (+/-2bp)			2 clinvar	1 clinvar		3
Total	0	0	2	1	0	3

Highest pathogenic variant AF is 0.00000657056

Loading ClinVar variants...

Transcript Catalog

Annotated transcript isoforms across RefSeq and Ensembl databases

Showing 0 of 0 transcripts

Transcript ID	Source	Protein ID	Coding Exons	MANE Status
No transcripts match your selected source or search query.

dbNSFP Gene Annotations

Source: dbNSFP