ARHGEF17-AS1

ARHGEF17 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 11:73306996-73310413

Links

ENSG00000257038 ∙ NCBI:100287837 ∙ ∙ HGNC:55485 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the ARHGEF17-AS1 gene.

• Inborn genetic diseases (12 variants)
• not provided (3 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the ARHGEF17-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			12	2	1	15
Total	0	0	12	2	1

Variants in ARHGEF17-AS1

This is a list of pathogenic ClinVar variants found in the ARHGEF17-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
11-73308662-C-G			Likely benign (Sep 01, 2022)
11-73308682-C-T		not specified	Uncertain significance (Feb 05, 2024)
11-73308688-A-C		not specified	Uncertain significance (Apr 26, 2024)
11-73308733-A-G		not specified	Uncertain significance (Apr 22, 2022)
11-73308759-C-T		not specified	Uncertain significance (Mar 20, 2023)
11-73308768-T-A		not specified	Uncertain significance (Jul 13, 2021)
11-73308838-C-A		not specified	Uncertain significance (Dec 16, 2023)
11-73308840-G-A		not specified	Uncertain significance (Jul 05, 2022)
11-73308852-C-T		not specified	Uncertain significance (Nov 18, 2023)
11-73308870-C-T		not specified	Uncertain significance (Jul 05, 2023)
11-73308877-C-T		not specified	Uncertain significance (Dec 04, 2023)
11-73308898-G-A		not specified	Uncertain significance (Dec 15, 2023)
11-73308934-C-T		not specified	Uncertain significance (Mar 19, 2024)
11-73308978-G-T		not specified	Uncertain significance (Mar 19, 2024)
11-73308979-C-A		not specified	Uncertain significance (Mar 19, 2024)
11-73309011-A-C		not specified	Uncertain significance (Feb 14, 2023)
11-73309055-G-C		not specified	Uncertain significance (Feb 09, 2022)
11-73309093-G-A		not specified	Uncertain significance (Dec 28, 2022)
11-73309116-C-A		not specified	Uncertain significance (Jun 22, 2023)
11-73309122-G-C		not specified	Uncertain significance (Jul 10, 2023)
11-73309163-A-C			Likely benign (Feb 01, 2023)
11-73309176-G-A		not specified	Uncertain significance (Sep 26, 2023)
11-73309226-G-C		not specified	Uncertain significance (Mar 28, 2024)
11-73309254-C-T		not specified	Uncertain significance (Apr 01, 2024)
11-73309298-C-G		not specified	Uncertain significance (Jun 12, 2023)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP