C11orf97

protein-coding

chromosome 11 open reading frame 97

Gene summary

Predicted to be located in ciliary basal body. Predicted to be active in ciliary base. [provided by Alliance of Genome Resources, Jul 2025]

Previous symbols:
  • LINC01171

MANE transcript

NM_001190462.2

Inheritance

—

ClinVar variants

U:4

Top phenotype

—

Max pathogenic AF

—

Genomic locus

chr11:94,512,461-94,532,123

External References & Databases

Transcript & Mutation Effects

hg38 • Region Span ~19.7 kb
Loading mutation effect viewer...

GenCC Phenotypes & Disease Associations

Curated gene-disease validity assertions and inheritance patterns

No GenCC data available for this gene.

ClinVar Associated Diseases & Phenotypes

Reported disease conditions connected to C11orf97 variants in ClinVar

1 Conditions Cataloged
not specifiedTotal: 4

ClinVar Variants & Pathogenicity by Type

Statistics based on transcript NM_001190462.2. Only rare variants are included.

We include only reliable ClinVar variants with their consequences to MANE Select, MANE Plus Clinical transcripts, or transcripts with TSL equal to 1. Click a count to filter the variants table below.

Slight differences between displayed counts and ClinVar may occur due to a different transcript/consequence chosen by our variant effect predictor, or because we classify Benign/Likely benign as Likely benign and Pathogenic/Likely pathogenic as Likely pathogenic.

EffectPLPVUSLBBSum
synonymous
0
missense
4
clinvar
4
nonsense
0
start loss
0
frameshift
0
splice donor/acceptor (+/-2bp)
0
Total004004
Loading ClinVar variants...

Transcript Catalog

Annotated transcript isoforms across RefSeq and Ensembl databases

Showing 4 of 8 transcripts
Transcript IDSourceProtein IDCoding ExonsMANE Status
NM_001190462.2RefSeqNP_001177391.14MANE Select
ENST00000542198.3EnsemblENSP00000490577.14MANE Select
ENST00000966615.1EnsemblENSP00000636674.13Standard
ENST00000966615.2EnsemblENSP00000636674.13Standard

Gene Ontology (GO) Annotations & Pathways

Biological processes, molecular functions, cellular components and pathways

Cellular Component

  • cytoplasm
  • ciliary basal body
  • ciliary base

dbNSFP Gene Annotations

Source: dbNSFP

For research and educational, non-commercial use only. Not for clinical or diagnostic use. GeneBe does not provide medical advice. Data use for AI modeling is prohibited: if used, the cost is $0.001 per byte of downloaded uncompressed data.