CD101-AS1

CD101 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 1:117025481-117060845

Links

ENSG00000236137 ∙ NCBI:101929099 ∙ ∙ HGNC:55665 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the CD101-AS1 gene.

• Inborn genetic diseases (10 variants)
• not provided (5 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the CD101-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			10	1	4	15
Total	0	0	10	1	4

Variants in CD101-AS1

This is a list of pathogenic ClinVar variants found in the CD101-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
1-117025520-C-T		not specified	Uncertain significance (Jan 24, 2024)
1-117025577-C-T		not specified	Uncertain significance (Aug 14, 2023)
1-117025667-G-A		not specified	Uncertain significance (Mar 02, 2023)
1-117025698-A-G		not specified	Uncertain significance (Oct 19, 2024)
1-117025709-G-T		not specified	Uncertain significance (Oct 12, 2022)
1-117025727-C-A		not specified	Uncertain significance (Feb 22, 2023)
1-117025729-C-T			Likely benign (Mar 01, 2022)
1-117025739-T-C		not specified	Uncertain significance (May 17, 2023)
1-117025740-C-T		not specified	Uncertain significance (Dec 21, 2023)
1-117025766-C-T		not specified	Uncertain significance (Feb 18, 2025)
1-117025878-G-A			Benign (Dec 31, 2019)
1-117025882-G-C		not specified	Uncertain significance (Feb 02, 2022)
1-117025888-C-A			Benign (Dec 31, 2019)
1-117025892-G-T		not specified	Uncertain significance (Dec 04, 2024)
1-117033892-G-C		not specified	Uncertain significance (May 03, 2023)
1-117033922-C-T		not specified	Uncertain significance (Dec 02, 2021)
1-117033937-C-T		not specified	Uncertain significance (Jan 11, 2023)
1-117033990-A-G			Benign (May 08, 2018)
1-117034009-C-T			Benign (Dec 31, 2019)
1-117034010-G-A		not specified	Likely benign (Feb 23, 2025)
1-117034021-G-T		not specified	Likely benign (Jan 23, 2025)
1-117034055-T-C		not specified	Uncertain significance (Aug 10, 2024)
1-117034067-G-A		not specified	Uncertain significance (Aug 23, 2021)
1-117034075-G-T		not specified	Uncertain significance (Sep 20, 2024)
1-117060369-A-G		not specified	Uncertain significance (Jul 09, 2021)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP