CDC42EP3-AS1

CDC42EP3 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 2:37425634-37921937

Links

ENSG00000236213 ∙ ∙ ∙ HGNC:56370 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the CDC42EP3-AS1 gene.

• Inborn genetic diseases (16 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the CDC42EP3-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			16			16
Total	0	0	16	0	0

Variants in CDC42EP3-AS1

This is a list of pathogenic ClinVar variants found in the CDC42EP3-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
2-37645933-T-C		not specified	Uncertain significance (Jul 14, 2023)
2-37645947-A-G		not specified	Uncertain significance (Jan 26, 2022)
2-37645960-G-T		not specified	Uncertain significance (Apr 20, 2023)
2-37645965-G-C		not specified	Uncertain significance (Jul 26, 2023)
2-37645974-A-C		not specified	Uncertain significance (Aug 02, 2021)
2-37645984-C-T		not specified	Uncertain significance (Apr 27, 2024)
2-37645996-C-T		not specified	Uncertain significance (Feb 08, 2023)
2-37646062-C-T		not specified	Uncertain significance (Dec 15, 2023)
2-37646127-T-A		not specified	Uncertain significance (May 24, 2023)
2-37646143-T-A		not specified	Uncertain significance (Apr 15, 2024)
2-37646153-G-C		not specified	Uncertain significance (Jan 06, 2023)
2-37646182-C-G		not specified	Uncertain significance (Jun 17, 2024)
2-37646182-C-T		not specified	Uncertain significance (Apr 04, 2023)
2-37646218-A-C		not specified	Uncertain significance (Dec 22, 2023)
2-37646295-G-A		not specified	Uncertain significance (Apr 05, 2023)
2-37646311-A-G		not specified	Uncertain significance (Jul 06, 2021)
2-37646322-C-T		not specified	Uncertain significance (Oct 02, 2023)
2-37646324-G-T		not specified	Uncertain significance (Apr 28, 2022)
2-37646420-A-C		not specified	Uncertain significance (May 14, 2024)
2-37646421-A-G		not specified	Uncertain significance (Oct 12, 2022)
2-37646430-A-G		CDC42EP3-related condition	Uncertain significance (May 13, 2024)
2-37646451-T-C		not specified	Uncertain significance (Sep 27, 2021)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP