CEACAM16-AS1

CEACAM16, CEACAM19 and PVR antisense RNA 1, the group of Antisense RNAs

Basic information

Links

ENSG00000266903

∙ NCBI:107985305 ∙ ∙ HGNC:55317 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the CEACAM16-AS1 gene.

not provided (148 variants)
Inborn genetic diseases (46 variants)
not specified (41 variants)
Autosomal dominant nonsyndromic hearing loss 4B (9 variants)
Hearing loss, autosomal recessive 113 (3 variants)
Hearing impairment (3 variants)
Autosomal dominant nonsyndromic hearing loss 4B;Hearing loss, autosomal recessive 113 (3 variants)
Nonsyndromic genetic hearing loss (2 variants)
Abnormality of the ear (1 variants)
Hearing loss, autosomal recessive 113;Autosomal dominant nonsyndromic hearing loss 4B (1 variants)
Rare genetic deafness (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the CEACAM16-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region ? Intron variants in splice region, excluding donor/acceptor (+/-2bp)						0
non coding ? UTR, intron and other, non coding variants	7 clinvar	4 clinvar	101 clinvar	71 clinvar	28 clinvar	211
Total	7	4	101	71	28

Highest pathogenic variant AF is 0.0000263

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP