CEACAM8
protein-codingCEA cell adhesion molecule 8, the group of CEA cell adhesion molecule family|V-set domain containing|CD molecules
Gene summary
Enables protein heterodimerization activity. Involved in heterophilic cell-cell adhesion. Located in cell surface and obsolete extracellular space. Biomarker of severe acute respiratory syndrome. [provided by Alliance of Genome Resources, Jun 2026]
- CGM6
MANE transcript
Inheritance
ClinVar variants
Top phenotype
gnomAD constraint
Max pathogenic AF
Genomic locus
External References & Databases
Transcript & Mutation Effects
hg38 • Region Span ~14.8 kbGenCC Phenotypes & Disease Associations
Curated gene-disease validity assertions and inheritance patterns
No GenCC data available for this gene.
ClinVar Associated Diseases & Phenotypes
Reported disease conditions connected to CEACAM8 variants in ClinVar
ClinVar Variants & Pathogenicity by Type
Statistics based on transcript NM_001816.4. Only rare variants are included.
We include only reliable ClinVar variants with their consequences to MANE Select, MANE Plus Clinical transcripts, or transcripts with TSL equal to 1. Click a count to filter the variants table below.
Slight differences between displayed counts and ClinVar may occur due to a different transcript/consequence chosen by our variant effect predictor, or because we classify Benign/Likely benign as Likely benign and Pathogenic/Likely pathogenic as Likely pathogenic.
| Effect | PathogenicP | Likely pathogenicLP | VUS | Likely benignLB | BenignB | Sum |
|---|---|---|---|---|---|---|
| synonymous | 0 | |||||
| missense | 57 | 5 | 62 | |||
| nonsense | 1 | 1 | ||||
| start loss | 0 | |||||
| frameshift | 0 | |||||
| splice donor/acceptor (+/-2bp) | 0 | |||||
| Total | 0 | 0 | 58 | 5 | 0 | 63 |
Transcript Catalog
Annotated transcript isoforms across RefSeq and Ensembl databases
| Transcript ID | Source | Protein ID | Coding Exons | MANE Status |
|---|---|---|---|---|
| RefSeq | NP_001807.2 | 5 | MANE Select | |
| Ensembl | ENSP00000244336.5 | 5 | MANE Select | |
| Ensembl | ENSP00000472166.1 | 2 | Standard | |
| Ensembl | ENSP00000472166.1 | 2 | Standard |
Gene Ontology (GO) Annotations & Pathways
Biological processes, molecular functions, cellular components and pathways
Pathways ConsensusPathDB
- Neutrophil degranulation
- Extracellular matrix organization
- Innate Immune System
- Immune System
- Fibronectin matrix formation
Biological Process
- immune response
- heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
- neutrophil degranulation
- leukocyte migration
Molecular Function
- protein binding
- protein heterodimerization activity
Cellular Component
- extracellular space
- plasma membrane
- cell surface
- anchored component of membrane
- azurophil granule membrane
gnomAD Constraint
Source:
- Gene type
- protein_coding
- Transcript type
- protein_coding
- Transcript
- ENST00000244336
- Coding exons
- 5
- Length
- 14815
- Individuals with no LoFs
- 125717
- Homozygous LoFs
- 0
- Heterozygous LoFs
- 28
- Defined
- 125745
- p
- 0.000111
| Z-Score | Observed | Expected | Observed/Expected | Mutation Rate | Total Possible | |
|---|---|---|---|---|---|---|
| Missense | -0.565 | 220 | 198 | 1.11 | 0.0000104 | 2251 |
| Missense (PolyPhen) | 55 | 46.595 | 1.1804 | 642 | ||
| Synonymous | -0.582 | 83 | 76.5 | 1.08 | 0.00000412 | 739 |
| Loss of Function | 0.950 | 12 | 16.1 | 0.745 | 9.20e-7 | 157 |
Population LoF Frequency
| Population | CAF | p-value | Status |
|---|---|---|---|
| African | 0 | 0.0 | absent |
| Latino/Admixed American | 0.000029 | 0.000029 | rare |
| Ashkenazi Jewish | 0 | 0.0 | absent |
| East Asian | 0.00017 | 0.00016 | rare |
| Finnish | 0 | 0.0 | absent |
| European (Non-Finnish) | 0.00020 | 0.00018 | rare |
| South Asian | 0.000083 | 0.000065 | rare |
| Other | 0.00016 | 0.00016 | rare |
dbNSFP Gene Annotations
Source:
- Function
- FUNCTION: Cell surface glycoprotein that plays a role in cell adhesion in a calcium-independent manner (PubMed:8776764, PubMed:2022629, PubMed:11590190). Mediates heterophilic cell adhesion with other carcinoembryonic antigen-related cell adhesion molecules, such as CEACAM6 (PubMed:8776764, PubMed:2022629, PubMed:11590190). Heterophilic interaction with CEACAM8 occurs in activated neutrophils (PubMed:8776764). {ECO:0000269|PubMed:11590190, ECO:0000269|PubMed:2022629, ECO:0000269|PubMed:8776764}.;
Recessive Scores
- pRec
- 0.161
Intolerance Scores
- LoFtool
- 0.934
- RVIS EVS
- 0.22
- RVIS percentile EVS
- 68.38
Essentials
- Essential (CRISPR)
- N
- Essential (CRISPR2)
- N
- Essential (gene trap)
- N
- Indispensability pred.
- E
- Indispensability score
- 0.815
Gene Damage Prediction
| All | Recessive | Dominant | |
|---|---|---|---|
| Mendelian | Medium | Medium | Medium |
| Primary Immunodeficiency | Medium | Medium | Medium |
| Cancer | Medium | Medium | Medium |