CEDORA

CDH13 antisense oligodendrocyte and neuron associated lncRNA, the group of Long non-coding RNAs with non-systematic symbols

Basic information

Region (hg38): 16:83706000-83772974

Links

ENSG00000260788 ∙ NCBI:124903732 ∙ ∙ HGNC:56653 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the CEDORA gene.

• not provided (4 variants)
• Inborn genetic diseases (2 variants)
• not specified (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the CEDORA gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			2	1	4	7
Total	0	0	2	1	4

Variants in CEDORA

This is a list of pathogenic ClinVar variants found in the CEDORA region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
16-83747797-C-T			Benign (Jun 18, 2021)
16-83747999-T-C			Benign (Jun 18, 2021)
16-83748208-G-A		not specified	Uncertain significance (Feb 22, 2023)
16-83748217-G-A		not specified	Uncertain significance (Jul 30, 2023)
16-83748258-C-G		not specified	Likely benign (-)
16-83748314-T-C			Benign (Jun 19, 2021)
16-83748390-A-C			Benign (Jun 18, 2021)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP