DUSP13A

dual specificity phosphatase 13A, the group of Atypical dual specificity phosphatases

Basic information

Region (hg38): 10:75094434-75109221

Links

ENSG00000293543 ∙ NCBI:128854680 ∙ ∙ HGNC:56772 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the DUSP13A gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the DUSP13A gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous				1		1
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region			1			1
non coding			28	2	5	35
Total	0	0	28	3	5

Variants in DUSP13A

This is a list of pathogenic ClinVar variants found in the DUSP13A region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
10-75094683-C-T		not specified	Uncertain significance (Jun 25, 2024)
10-75094684-G-A		not specified	Uncertain significance (Nov 25, 2024)
10-75094689-G-A		not specified	Uncertain significance (Aug 08, 2023)
10-75094695-C-T		not specified	Uncertain significance (Feb 08, 2025)
10-75094696-G-A		not specified	Uncertain significance (Jun 10, 2022)
10-75094704-C-T			Benign (May 15, 2018)
10-75094705-G-C			Benign (May 15, 2018)
10-75094723-G-C		not specified	Uncertain significance (Jan 10, 2022)
10-75094728-C-T		not specified	Uncertain significance (May 17, 2023)
10-75094729-G-A		not specified	Uncertain significance (Feb 17, 2022)
10-75094749-C-A		not specified	Uncertain significance (Feb 21, 2024)
10-75094758-C-T		not specified	Uncertain significance (Aug 12, 2021)
10-75094773-G-A		not specified	Uncertain significance (Sep 30, 2024)
10-75094806-C-T			Benign (Feb 17, 2020)
10-75094821-G-T		not specified	Uncertain significance (Apr 26, 2023)
10-75094842-C-T		not specified	Uncertain significance (Mar 15, 2024)
10-75094843-G-A		not specified	Uncertain significance (May 17, 2023)
10-75094855-T-A		not specified	Uncertain significance (Jul 27, 2022)
10-75094875-C-T		not specified	Uncertain significance (Oct 20, 2021)
10-75094876-G-A		not specified	Uncertain significance (Mar 29, 2023)
10-75095584-C-T		not specified	Likely benign (Aug 03, 2022)
10-75095592-G-C		not specified	Uncertain significance (Jun 17, 2024)
10-75095607-C-T		not specified	Uncertain significance (Sep 17, 2021)
10-75095610-G-T		not specified	Uncertain significance (Mar 21, 2023)
10-75095638-C-T		not specified	Uncertain significance (Feb 06, 2025)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP