EFNA4-EFNA3

Basic information

Region (hg38): 1:155063748-155086807

Links

ENSG00000251246 ∙ ∙ ∙ ∙ ∙ ∙ ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the EFNA4-EFNA3 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the EFNA4-EFNA3 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in EFNA4-EFNA3

This is a list of pathogenic ClinVar variants found in the EFNA4-EFNA3 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
1-155063928-T-A		not specified	Uncertain significance (Dec 19, 2022)
1-155063931-C-A			Uncertain significance (May 12, 2023)
1-155063943-G-A			Likely benign (Aug 14, 2024)
1-155063954-G-A			Likely benign (Oct 23, 2022)
1-155063955-G-A			Benign (Sep 01, 2022)
1-155066712-C-G			Likely benign (Oct 21, 2024)
1-155066717-G-A			Likely benign (Jun 03, 2024)
1-155066749-G-C		not specified	Uncertain significance (Feb 07, 2025)
1-155066794-C-T			Likely benign (Jan 06, 2025)
1-155066801-A-G		not specified	Uncertain significance (Mar 31, 2024)
1-155066827-G-A			Uncertain significance (Mar 23, 2024)
1-155066832-G-A			Likely benign (Oct 23, 2024)
1-155066845-A-G		not specified	Uncertain significance (May 30, 2023)
1-155066891-G-A		not specified	Uncertain significance (Jan 26, 2025)
1-155066894-C-A			Uncertain significance (Sep 24, 2024)
1-155066896-T-G		not specified	Uncertain significance (Mar 28, 2023)
1-155066913-C-T			Likely benign (Jul 29, 2023)
1-155066941-T-C			Uncertain significance (Dec 17, 2021)
1-155066952-T-C			Likely benign (Feb 14, 2024)
1-155066963-C-T			Uncertain significance (May 25, 2022)
1-155066965-C-A			Likely benign (Oct 23, 2024)
1-155066976-C-T			Likely benign (Oct 17, 2024)
1-155066988-C-T			Benign/Likely benign (Jan 30, 2025)
1-155066990-T-C		not specified	Uncertain significance (Mar 14, 2025)
1-155067002-C-G		not specified	Uncertain significance (Feb 28, 2023)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP