ENG
protein-codingendoglin, the group of CD molecules
Gene summary
This gene encodes a homodimeric transmembrane protein which is a major glycoprotein of the vascular endothelium. This protein is a component of the transforming growth factor beta receptor complex and it binds to the beta1 and beta3 peptides with high affinity. Mutations in this gene cause hereditary hemorrhagic telangiectasia, also known as Osler-Rendu-Weber syndrome 1, an autosomal dominant multisystemic vascular dysplasia. This gene may also be involved in preeclampsia and several types of cancer. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2013]
- ORW1
- ORW
MANE transcript
Inheritance
ClinVar variants
Top phenotype
gnomAD constraint
Max pathogenic AF
Genomic locus
External References & Databases
Transcript & Mutation Effects
hg38 • Region Span ~43.6 kbGenCC Phenotypes & Disease Associations
Curated gene-disease validity assertions and inheritance patterns
Inheritance Pattern: AD
Disease ID:MONDO:0017380
Submitter: ClinGen
Juvenile polyposis syndrome (JPS) is characterized by predisposition to hamartomatous polyps in the gastrointestinal (GI) tract, specifically in the stomach, small intestine, colon, and rectum. The term "juvenile" refers to the type of polyp rather than to the age of onset of polyps.ENG was first reported in relation to autosomal dominant JPS in 2005 (Sweet et al., PMID: 16287957). ENG (Endoglin) is a component of the transforming growth factor beta (TGFB) receptor complex and binds TGFB1 with a crucial role in vascular development and angiogenesis. Haploinsufficient variants account for over 85% of patients with a clinical diagnosis of hereditary hemorrhagic telangiectasia (HHT) and have been found to have a Definitive relationship with HHT (see separate curation). Variants in ENG genes were subsequently reported in patients with JPS without overlapped HHT phenotype. Therefore, per the ClinGen Lumping and Splitting Working Group this curation solely focuses on JPS phenotype with regard to curating the limited information available for this split curation. Seven missense variants that have been reported in eight probands in three publications (PMIDs: 16287957, 17204053, 23399955) are included in this curation. All of these JPS associated ENG variants are variants of uncertain pathogenicity (0.3 point). There were two research articles showing endoglin expression was increased in various cancer tissues including colon (1 point). Combination of genetic and experimental evidence has not demonstrated convincing definitive validity of ENG gene in inherited JPS. In summary, there is limited evidence to support this gene-disease relationship.
Inheritance Pattern: AD
Disease ID:MONDO:0008535
Submitter: G2P
Inheritance Pattern: AD
Disease ID:MONDO:0008535
Submitter: Genomics England PanelApp
Inheritance Pattern: AD
Disease ID:MONDO:0019180
Submitter: PanelApp Australia
Inheritance Pattern: AD
Disease ID:MONDO:0008535
Submitter: Labcorp Genetics (formerly Invitae)
Inheritance Pattern: AD
Disease ID:MONDO:0008535
Submitter: ClinGen
The relationship between *ENG* and autosomal dominant Hereditary Hemorrhagic Telangiectasia, Type 1 (HHT1) was evaluated using the ClinGen Clinical Validity Framework as of Apr 11, 2019. *ENG* was first reported in relation to HHT1 in 1994 (McAllister et al., PMID: 7894484). HHT1 is diagnosed by the presence of 3 or more of the Curacao criteria (PMID: 10751092). *ENG* is an auxiliary component of the TGF-β receptor system and interacts with *ACVRL1* in the TGF-β pathway. *ACVRL1* is known to cause HHT2. The mechanism for disease is haploinsufficiency (PMID: 15879500, 25312062); however a dominant negative mechanism is also reported (PMID: 25312062), and at least 507 *ENG* variants, ranging from missense, in-frame indel to nonsense, frameshift, large deletions and whole gene deletions, have been reported in humans (http://www.arup.utah.edu/database/ENG/ENG_welcome.php). Evidence supporting this gene-disease relationship includes case-level data, segregation data and experimental data. Variants included in this curation come from 13 probands in 6 publications (PMIDs 7894484, 20414677, 30763665, 17384219, 20364125), and segregated with disease in 13 additional family members. More evidence is available in the literature, but the maximum score for genetic evidence (12 pts) has been reached. This gene-disease relationship is further supported by animal models and in vitro functional assays. A number of mouse models have been developed for HHT (PMID: 10348742, 20224041, 20364125 ) and interaction with *ACVRl1* in the TGF-β pathway has been experimentally demonstrated (PMID: 15702480, 12015308, 25312062). In summary, *ENG* is definitively associated with autosomal dominant hereditary hemorrhagic telangiectasia, Type 1. This has been repeatedly demonstrated in both the research and clinical diagnostic settings, and has been upheld over time. This classification was approved by the ClinGen Hemostasis/Thrombosis Gene Curation Expert Panel on August 28, 2019 (SOP Version 6). It was reevaluated on 11/28/2022 to update scoring. Of note, pulmonary arterial hypertension (PAH) is a rare but severe complication of HHT1 that was independently evaluated as of September 22, 2021 by the Pulmonary Hypertension GCEP. At least 13 probands with rare, predicted deleterious variants have been reported (PMIDs: 14684682, 15687131, 23919827, 26387786, 29650961, 31727138). Experimental evidence for a gene-disease relationship for HHT-PAH largely overlaps that for HHT. Spontaneous pulmonary hypertension in an Eng knockout HHT mouse model (PMID: 21859819) adds further support.
Inheritance Pattern: AD
Disease ID:MONDO:0019180
Submitter: Orphanet
Clinical Genomic Database (CGD)
Manifestation: Cardiovascular; Gastrointestinal; Hematologic
Intervention: Hematologic
Rationale: Individuals may have a variety of vascular complications, such as arteriovenous malformations (eg, pulmonary arteriovenous malformations, which can lead to a number of complications, including cerebral abscesses) and bleeding diatheses, and surveillance, preventative measures, and early intervention related to manifestations (eg, related to epistaxis, thromboembolism, or hepatic disease) may decrease morbidity and mortality
Comments: Oncologic complications have been reported (in Juvenile polyposis syndrome), but the evidence appears overall unclear
ClinVar Associated Diseases & Phenotypes
Reported disease conditions connected to ENG variants in ClinVar
ClinVar Variants & Pathogenicity by Type
Statistics based on transcript NM_001114753.3. Only rare variants are included.
We include only reliable ClinVar variants with their consequences to MANE Select, MANE Plus Clinical transcripts, or transcripts with TSL equal to 1. Click a count to filter the variants table below.
Slight differences between displayed counts and ClinVar may occur due to a different transcript/consequence chosen by our variant effect predictor, or because we classify Benign/Likely benign as Likely benign and Pathogenic/Likely pathogenic as Likely pathogenic.
| Effect | PathogenicP | Likely pathogenicLP | VUS | Likely benignLB | BenignB | Sum |
|---|---|---|---|---|---|---|
| synonymous | 3 | 4 | 5 | 418 | 1 | 431 |
| missense | 32 | 88 | 426 | 180 | 12 | 738 |
| nonsense | 80 | 9 | 2 | 91 | ||
| start loss | 8 | 8 | ||||
| frameshift | 272 | 36 | 2 | 310 | ||
| splice donor/acceptor (+/-2bp) | 62 | 30 | 5 | 97 | ||
| Total | 457 | 167 | 440 | 598 | 13 | 1675 |
Highest pathogenic variant AF is 0.000019153471
Transcript Catalog
Annotated transcript isoforms across RefSeq and Ensembl databases
| Transcript ID | Source | Protein ID | Coding Exons | MANE Status |
|---|---|---|---|---|
| RefSeq | NP_001108225.1 | 15 | MANE Select | |
| Ensembl | ENSP00000362299.4 | 15 | MANE Select | |
| RefSeq | NP_000109.1 | 14 | Standard | |
| RefSeq | NP_001265067.1 | 11 | Standard |
Gene Ontology (GO) Annotations & Pathways
Biological processes, molecular functions, cellular components and pathways
Pathways ConsensusPathDB
- Hypothesized Pathways in Pathogenesis of Cardiovascular Disease
- TGF-beta Receptor Signaling
- TGF_beta_Receptor
- ALK1 signaling events
- HIF-1-alpha transcription factor network
Biological Process
- chronological cell aging
- branching involved in blood vessel morphogenesis
- vasculogenesis
- positive regulation of protein phosphorylation
- heart looping
Molecular Function
- transmembrane signaling receptor activity
- transforming growth factor beta receptor, cytoplasmic mediator activity
- type II transforming growth factor beta receptor binding
- protein binding
- galactose binding
Cellular Component
- extracellular space
- focal adhesion
- external side of plasma membrane
- integral component of membrane
- receptor complex
gnomAD Constraint
Source:
- Gene type
- protein_coding
- Transcript type
- protein_coding
- Transcript
- ENST00000373203
- Coding exons
- 15
- Length
- 39745
- Individuals with no LoFs
- 125743
- Homozygous LoFs
- 0
- Heterozygous LoFs
- 4
- Defined
- 125747
- p
- 0.0000159
| Z-Score | Observed | Expected | Observed/Expected | Mutation Rate | Total Possible | |
|---|---|---|---|---|---|---|
| Missense | 0.935 | 338 | 390 | 0.867 | 0.0000235 | 4238 |
| Missense (PolyPhen) | 65 | 115.24 | 0.56403 | 1363 | ||
| Synonymous | -0.252 | 174 | 170 | 1.02 | 0.0000112 | 1370 |
| Loss of Function | 4.78 | 3 | 32.3 | 0.0929 | 0.00000177 | 335 |
Population LoF Frequency
| Population | CAF | p-value | Status |
|---|---|---|---|
| African | 0 | 0.0 | absent |
| Latino/Admixed American | 0.000035 | 0.000029 | rare |
| Ashkenazi Jewish | 0 | 0.0 | absent |
| East Asian | 0.000054 | 0.000054 | rare |
| Finnish | 0 | 0.0 | absent |
| European (Non-Finnish) | 0.0000093 | 0.0000088 | rare |
| South Asian | 0.000033 | 0.000033 | rare |
| Other | 0 | 0.0 | absent |
dbNSFP Gene Annotations
Source:
- Function
- FUNCTION: Vascular endothelium glycoprotein that plays an important role in the regulation of angiogenesis (PubMed:21737454, PubMed:23300529). Required for normal structure and integrity of adult vasculature (PubMed:7894484). Regulates the migration of vascular endothelial cells (PubMed:17540773). Required for normal extraembryonic angiogenesis and for embryonic heart development (By similarity). May regulate endothelial cell shape changes in response to blood flow, which drive vascular remodeling and establishment of normal vascular morphology during angiogenesis (By similarity). May play a critical role in the binding of endothelial cells to integrins and/or other RGD receptors (PubMed:1692830). Acts as TGF-beta coreceptor and is involved in the TGF-beta/BMP signaling cascade that ultimately leads to the activation of SMAD transcription factors (PubMed:8370410, PubMed:21737454, PubMed:22347366, PubMed:23300529). Required for GDF2/BMP9 signaling through SMAD1 in endothelial cells and modulates TGFB1 signaling through SMAD3 (PubMed:21737454, PubMed:22347366, PubMed:23300529). {ECO:0000250|UniProtKB:Q63961, ECO:0000269|PubMed:17540773, ECO:0000269|PubMed:21737454, ECO:0000269|PubMed:23300529, ECO:0000269|PubMed:7894484, ECO:0000269|PubMed:8370410, ECO:0000305|PubMed:1692830}.;
- Disease
- DISEASE: Telangiectasia, hereditary hemorrhagic, 1 (HHT1) [MIM:187300]: A multisystemic vascular dysplasia leading to dilation of permanent blood vessels and arteriovenous malformations of skin, mucosa, and viscera. The disease is characterized by recurrent epistaxis and gastro-intestinal hemorrhage. Visceral involvement includes arteriovenous malformations of the lung, liver, and brain. {ECO:0000269|PubMed:10545596, ECO:0000269|PubMed:10625079, ECO:0000269|PubMed:10982033, ECO:0000269|PubMed:15024723, ECO:0000269|PubMed:15712270, ECO:0000269|PubMed:16525724, ECO:0000269|PubMed:16752392, ECO:0000269|PubMed:20414677, ECO:0000269|PubMed:7894484, ECO:0000269|PubMed:9157574, ECO:0000269|PubMed:9245986, ECO:0000269|PubMed:9554745}. Note=The disease is caused by mutations affecting the gene represented in this entry.;
Recessive Scores
- pRec
- 0.766
Intolerance Scores
- LoFtool
- 0.0316
- RVIS EVS
- -0.39
- RVIS percentile EVS
- 27.03
Essentials
- Essential (CRISPR)
- N
- Essential (CRISPR2)
- N
- Essential (gene trap)
- N
- Indispensability pred.
- E
- Indispensability score
- 0.779
Gene Damage Prediction
| All | Recessive | Dominant | |
|---|---|---|---|
| Mendelian | Medium | Medium | Medium |
| Primary Immunodeficiency | Medium | Medium | Medium |
| Cancer | Medium | Medium | Medium |