F10-AS1

F10 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 13:113128150-113130051

Links

ENSG00000231882 ∙ ∙ ∙ HGNC:40225 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the F10-AS1 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the F10-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in F10-AS1

This is a list of pathogenic ClinVar variants found in the F10-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
13-113129397-G-GGGAGCCTGGGTGAAGA			Benign (Jun 20, 2021)
13-113129444-C-T		Hereditary factor X deficiency disease	Benign/Likely benign (Dec 20, 2018)
13-113129458-T-C		Inborn genetic diseases	Uncertain significance (May 05, 2023)
13-113129461-G-A		Factor X deficiency	Uncertain significance (Apr 28, 2021)
13-113129465-G-T		Factor X deficiency	Uncertain significance (Apr 28, 2021)
13-113129470-A-G		Factor X deficiency	Uncertain significance (Apr 28, 2021)
13-113129471-G-C		Hereditary factor X deficiency disease	Benign (Dec 31, 2019)
13-113129488-C-A		Factor X deficiency	Uncertain significance (Apr 28, 2021)
13-113129492-G-A		Hereditary factor X deficiency disease	Benign (Dec 31, 2019)
13-113129500-G-C		Hereditary factor X deficiency disease	Likely pathogenic (-)
13-113129521-A-G		Factor X deficiency	Pathogenic (Nov 08, 1996)
13-113129523-A-C		Hereditary factor X deficiency disease • Inborn genetic diseases	Conflicting classifications of pathogenicity (Oct 05, 2023)
13-113129528-G-A			Likely benign (Jun 08, 2018)
13-113129533-G-A		Factor X deficiency	Uncertain significance (Apr 28, 2021)
13-113129541-G-A		Factor X deficiency • Hereditary factor X deficiency disease	Conflicting classifications of pathogenicity (Feb 01, 2019)
13-113129541-GAA-G		Hereditary factor X deficiency disease	Pathogenic (-)
13-113129542-A-G		Hereditary factor X deficiency disease • Factor X deficiency • F10-related disorder	Likely pathogenic (Feb 01, 2019)
13-113129548-A-G		Hereditary factor X deficiency disease	Likely pathogenic (May 05, 2023)
13-113129555-G-A		Inborn genetic diseases	Uncertain significance (Aug 02, 2021)
13-113129564-CT-TTGCTCATACGAAGAGGCCC		Hereditary factor X deficiency disease	Likely pathogenic (Jan 28, 2024)
13-113129581-C-T		F10-related disorder	Uncertain significance (Mar 29, 2024)
13-113129586-G-A		Hereditary factor X deficiency disease	Likely pathogenic (-)
13-113129593-T-C		Hereditary factor X deficiency disease	Likely pathogenic (-)
13-113129595-G-C		Factor X deficiency	Pathogenic (Sep 01, 1999)
13-113129612-G-C		Hereditary factor X deficiency disease	Uncertain significance (-)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP