FAM174A-DT

FAM174A divergent transcript, the group of Divergent transcripts

Basic information

Region (hg38): 5:100223281-100535947

Links

ENSG00000247877 ∙ ∙ ∙ HGNC:55584 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the FAM174A-DT gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the FAM174A-DT gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in FAM174A-DT

This is a list of pathogenic ClinVar variants found in the FAM174A-DT region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
5-100535537-G-C		not specified	Uncertain significance (May 09, 2024)
5-100535554-C-G		not specified	Uncertain significance (Jul 05, 2024)
5-100535556-G-C		not specified	Uncertain significance (Jan 24, 2024)
5-100535567-C-G		not specified	Uncertain significance (Aug 13, 2021)
5-100535601-C-T		not specified	Uncertain significance (Jan 26, 2023)
5-100535606-C-A		not specified	Uncertain significance (Sep 30, 2024)
5-100535640-C-G		not specified	Uncertain significance (Jun 25, 2024)
5-100535690-C-T		not specified	Uncertain significance (Jul 12, 2023)
5-100535733-G-A		not specified	Uncertain significance (Jan 16, 2024)
5-100535741-G-C		not specified	Uncertain significance (Oct 16, 2023)
5-100535766-C-A		not specified	Uncertain significance (Aug 02, 2021)
5-100535775-G-A		not specified	Uncertain significance (Aug 14, 2023)
5-100535818-C-A		not specified	Uncertain significance (May 27, 2022)
5-100535834-G-A		not specified	Uncertain significance (Jul 23, 2024)
5-100535874-C-G		not specified	Uncertain significance (Dec 12, 2023)
5-100535895-A-G		not specified	Uncertain significance (Sep 16, 2021)
5-100535928-G-T		not specified	Uncertain significance (May 05, 2023)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP