FBXO38-DT

FBXO38 divergent transcript, the group of Divergent transcripts

Basic information

Links

ENSG00000247199

∙ NCBI:102546294 ∙ ∙ HGNC:55589 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the FBXO38-DT gene.

Netherton syndrome (606 variants)
not provided (272 variants)
Inborn genetic diseases (48 variants)
not specified (43 variants)
Susceptibility to nonsyndromic otitis media (9 variants)
Increased circulating IgE level;Erythroderma (2 variants)
Otitis media, susceptibility to (1 variants)
SPINK5 POLYMORPHISM (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the FBXO38-DT gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region ? Intron variants in splice region, excluding donor/acceptor (+/-2bp)						0
non coding ? UTR, intron and other, non coding variants	51 clinvar	15 clinvar	347 clinvar	228 clinvar	184 clinvar	825
Total	51	15	347	228	184

Highest pathogenic variant AF is 0.0000460

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP