FSIP2-AS1

FSIP2 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 2:185653303-185864985

Links

ENSG00000231646 ∙ NCBI:107985781 ∙ ∙ HGNC:40978 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the FSIP2-AS1 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the FSIP2-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding		1	41	4		46
Total	0	1	41	4	0

Variants in FSIP2-AS1

This is a list of pathogenic ClinVar variants found in the FSIP2-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
2-185738658-A-G		not specified	Uncertain significance (Sep 23, 2023)
2-185738661-C-T		not specified	Uncertain significance (Aug 27, 2024)
2-185738692-C-A		not specified	Uncertain significance (Nov 08, 2022)
2-185738694-C-T		not specified	Uncertain significance (Feb 27, 2024)
2-185738710-G-A		not specified	Uncertain significance (Nov 08, 2024)
2-185738743-G-T		not specified	Uncertain significance (Aug 17, 2022)
2-185738775-G-A		not specified	Uncertain significance (Oct 04, 2022)
2-185738776-G-A		not specified	Uncertain significance (Jan 04, 2022)
2-185738791-T-C		not specified	Likely benign (Feb 21, 2024)
2-185738832-A-C		not specified	Uncertain significance (Mar 01, 2023)
2-185738835-G-A		not specified	Uncertain significance (Jun 28, 2022)
2-185738851-A-G		not specified	Uncertain significance (Feb 27, 2023)
2-185738857-G-A		not specified	Uncertain significance (Sep 01, 2021)
2-185738863-G-T		not specified	Uncertain significance (Mar 02, 2023)
2-185738884-C-T		not specified	Uncertain significance (Oct 24, 2023)
2-185738891-G-A		FSIP2-related disorder	Likely benign (Apr 11, 2019)
2-185738911-G-A		not specified	Uncertain significance (May 18, 2023)
2-185738980-A-G		not specified	Uncertain significance (Oct 30, 2023)
2-185738985-T-C		not specified	Uncertain significance (Feb 14, 2023)
2-185738993-C-T		FSIP2-related disorder	Likely benign (Apr 26, 2019)
2-185739377-G-A		not specified	Uncertain significance (Nov 07, 2022)
2-185739417-G-T			Likely benign (Dec 01, 2022)
2-185739439-G-A		not specified	Likely benign (Jun 10, 2024)
2-185743179-G-A			Uncertain significance (Mar 01, 2021)
2-185743184-T-C		FSIP2-related disorder	Likely benign (Apr 11, 2019)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP