GNA15-DT

GNA15 divergent transcript, the group of Divergent transcripts

Basic information

Region (hg38): 19:3141576-3155175

Links

ENSG00000267551 ∙ NCBI:100996351 ∙ ∙ HGNC:55293 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the GNA15-DT gene.

• Inborn genetic diseases (9 variants)
• not provided (2 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the GNA15-DT gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			9		2	11
Total	0	0	9	0	2

Variants in GNA15-DT

This is a list of pathogenic ClinVar variants found in the GNA15-DT region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
19-3148647-G-A		not specified	Uncertain significance (Jun 11, 2021)
19-3148650-G-A		not specified	Uncertain significance (Oct 05, 2023)
19-3148657-C-T		not specified	Uncertain significance (Oct 05, 2023)
19-3148660-A-T		not specified	Uncertain significance (Feb 27, 2024)
19-3148707-G-C		not specified	Uncertain significance (Oct 29, 2024)
19-3148723-T-C		not specified	Uncertain significance (Mar 01, 2023)
19-3148734-A-G		not specified	Uncertain significance (Dec 30, 2024)
19-3148752-C-G		not specified	Uncertain significance (Jan 03, 2025)
19-3150141-G-A			Benign (Dec 04, 2018)
19-3150267-T-A		not specified	Uncertain significance (Mar 07, 2023)
19-3151717-C-T		not specified	Uncertain significance (Apr 18, 2023)
19-3151725-G-T		not specified	Uncertain significance (Nov 17, 2023)
19-3151726-C-T		not specified	Uncertain significance (Nov 17, 2022)
19-3151765-G-A		not specified	Uncertain significance (Sep 22, 2022)
19-3151771-C-T		not specified	Uncertain significance (Aug 21, 2023)
19-3151782-G-A			Benign (Dec 04, 2018)
19-3151816-G-A		not specified	Uncertain significance (Oct 29, 2021)
19-3151825-A-G		not specified	Uncertain significance (Mar 27, 2023)
19-3151834-C-T		not specified	Uncertain significance (Jan 29, 2025)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP