GOLGA6L1

Gene

golgin A6 family like 1, the group of Golgin related

Gene summary

No gene description available in the current model. Review primary literature for detailed gene function and characteristics.

MANE transcript

NM_001001413.3

Inheritance

—

ClinVar variants

U:9B:1

Top phenotype

—

Max pathogenic AF

—

Genomic locus

chr15:23,127,066-23,136,822

External References & Databases

Transcript & Mutation Effects

hg38 • Region Span ~9.8 kb
Loading mutation effect viewer...

GenCC Phenotypes & Disease Associations

Curated gene-disease validity assertions and inheritance patterns

No GenCC data available for this gene.

ClinVar Associated Diseases & Phenotypes

Reported disease conditions connected to GOLGA6L1 variants in ClinVar

2 Conditions Cataloged
not specifiedTotal: 9
not providedTotal: 1

ClinVar Variants & Pathogenicity by Type

Statistics based on transcript NM_001001413.3. Only rare variants are included.

We include only reliable ClinVar variants with their consequences to MANE Select, MANE Plus Clinical transcripts, or transcripts with TSL equal to 1. Click a count to filter the variants table below.

Slight differences between displayed counts and ClinVar may occur due to a different transcript/consequence chosen by our variant effect predictor, or because we classify Benign/Likely benign as Likely benign and Pathogenic/Likely pathogenic as Likely pathogenic.

EffectPLPVUSLBBSum
synonymous
0
missense
9
clinvar
1
clinvar
10
nonsense
0
start loss
0
frameshift
0
splice donor/acceptor (+/-2bp)
0
Total0091010
Loading ClinVar variants...

Transcript Catalog

Annotated transcript isoforms across RefSeq and Ensembl databases

Showing 2 of 2 transcripts
Transcript IDSourceProtein IDCoding ExonsMANE Status
NM_001001413.3RefSeqNP_001001413.39MANE Select
ENST00000614055.2EnsemblENSP00000478478.19MANE Select

dbNSFP Gene Annotations

Source: dbNSFP

Essentials

Essential (CRISPR)
E
Indispensability pred.
N
Indispensability score
0.114

Gene Damage Prediction

AllRecessiveDominant
MendelianMediumLowLow
Primary ImmunodeficiencyMediumLowMedium
CancerMediumMediumMedium
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