HSD17B1-AS1

HSD17B1 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 17:42552431-42554841

Links

ENSG00000266962 ∙ NCBI:108783654 ∙ ∙ HGNC:55314 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the HSD17B1-AS1 gene.

• Inborn genetic diseases (18 variants)
• not provided (2 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the HSD17B1-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			17	1	2	20
Total	0	0	17	1	2

Variants in HSD17B1-AS1

This is a list of pathogenic ClinVar variants found in the HSD17B1-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
17-42552940-C-T		not specified	Uncertain significance (Dec 13, 2022)
17-42552961-G-A		not specified	Uncertain significance (Sep 22, 2022)
17-42552987-C-G		not specified	Uncertain significance (May 31, 2023)
17-42552994-G-C		not specified	Likely benign (Feb 06, 2024)
17-42552994-G-T		not specified	Likely benign (Mar 19, 2024)
17-42553159-C-G		not specified	Uncertain significance (Feb 26, 2024)
17-42553160-G-A		not specified	Likely benign (Mar 01, 2023)
17-42553196-C-A		not specified	Uncertain significance (Mar 28, 2022)
17-42553225-G-A		not specified	Uncertain significance (Feb 10, 2022)
17-42553253-C-T		not specified	Uncertain significance (Nov 08, 2022)
17-42553277-G-A		not specified	Uncertain significance (Aug 04, 2021)
17-42553451-G-C		not specified	Uncertain significance (Mar 29, 2024)
17-42553456-G-C		not specified	Uncertain significance (Jun 02, 2024)
17-42553483-G-C		not specified	Uncertain significance (Dec 08, 2021)
17-42553802-T-C		not specified	Uncertain significance (Mar 31, 2023)
17-42553850-G-C		not specified	Uncertain significance (Jun 13, 2023)
17-42553859-G-A		not specified	Uncertain significance (May 27, 2022)
17-42554447-G-A		not specified	Uncertain significance (Dec 07, 2021)
17-42554470-A-T		not specified	Uncertain significance (Sep 20, 2023)
17-42554496-C-T		not specified	Uncertain significance (Aug 08, 2023)
17-42554567-T-C			Benign (Jul 19, 2018)
17-42554661-C-T			Benign (May 02, 2018)
17-42554706-T-G		not specified	Uncertain significance (Nov 29, 2021)
17-42554712-A-C		not specified	Uncertain significance (Nov 02, 2023)
17-42554714-T-A		not specified	Uncertain significance (Feb 05, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP