ICAM4-AS1

ICAM4 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 19:10285797-10289326

Links

ENSG00000267607 ∙ ∙ ∙ HGNC:55990 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the ICAM4-AS1 gene.

• Inborn genetic diseases (14 variants)
• Landsteiner-Wiener phenotype (3 variants)
• not provided (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the ICAM4-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			16			16
Total	0	0	16	0	0

Variants in ICAM4-AS1

This is a list of pathogenic ClinVar variants found in the ICAM4-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
19-10287064-C-T		not specified	Uncertain significance (Jan 17, 2023)
19-10287066-G-A			Uncertain significance (-)
19-10287139-G-A		not specified	Uncertain significance (Aug 15, 2023)
19-10287157-T-C		not specified	Uncertain significance (Aug 21, 2023)
19-10287171-C-A		not specified	Uncertain significance (Jan 04, 2022)
19-10287194-C-T		not specified	Uncertain significance (Sep 16, 2021)
19-10287311-A-G		Landsteiner-Wiener phenotype	Affects (Aug 15, 1995)
19-10287321-C-A		Landsteiner-Wiener phenotype	Uncertain significance (-)
19-10287356-TGACCTGCGCA-T		Landsteiner-Wiener phenotype	Affects (Apr 01, 1996)
19-10287386-C-T		not specified	Uncertain significance (Nov 01, 2022)
19-10287563-C-T		not specified	Uncertain significance (May 03, 2023)
19-10287578-G-A		not specified	Uncertain significance (Mar 29, 2024)
19-10287586-T-C		not specified	Uncertain significance (Apr 01, 2024)
19-10287605-T-C		not specified	Uncertain significance (Oct 13, 2023)
19-10287620-C-G		not specified	Uncertain significance (Feb 10, 2022)
19-10287631-T-A		not specified	Uncertain significance (Nov 09, 2023)
19-10287649-C-T		not specified	Uncertain significance (Mar 13, 2023)
19-10287685-C-T		not specified	Uncertain significance (Oct 26, 2022)
19-10287727-G-A		not specified	Uncertain significance (Mar 23, 2022)
19-10287757-C-A		not specified	Uncertain significance (Feb 14, 2023)
19-10287763-G-C		ICAM4-related disorder	Likely benign (Feb 08, 2021)
19-10287789-C-T		not specified	Likely benign (Jan 04, 2024)
19-10287815-C-G		not specified	Uncertain significance (Aug 02, 2022)
19-10287819-A-C		not specified	Likely benign (Dec 11, 2023)
19-10287832-A-G		not specified	Uncertain significance (Nov 10, 2022)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP