LINC00967

long intergenic non-protein coding RNA 967, the group of Long intergenic non-protein coding RNAs

Basic information

Region (hg38): 8:66177238-66200904

Links

ENSG00000253138 ∙ NCBI:100505659 ∙ ∙ HGNC:48725 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the LINC00967 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the LINC00967 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in LINC00967

This is a list of pathogenic ClinVar variants found in the LINC00967 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
8-66177239-T-C		not specified	Uncertain significance (May 17, 2016)
8-66177276-T-A		not specified	Uncertain significance (May 13, 2019)
8-66177297-C-CCTGCGGCTGCTGGGGCTGCTCGGA		not specified	Uncertain significance (May 17, 2018)
8-66177323-T-TGCG		not specified	Benign (Dec 18, 2019)
8-66177355-A-C		not specified	Likely benign (Apr 23, 2021)
8-66177368-G-A		not specified	Uncertain significance (Mar 21, 2017)
8-66177389-G-C		Autosomal dominant nocturnal frontal lobe epilepsy • not specified	Likely benign (Sep 07, 2017)
8-66177393-C-T		not specified	Uncertain significance (May 24, 2019)
8-66177406-C-T		not specified	Likely benign (Jun 13, 2016)
8-66177408-C-T		not specified	Uncertain significance (Jul 06, 2018)
8-66177426-G-A		not specified	Uncertain significance (Dec 12, 2022)
8-66177427-C-G		not specified	Benign (Dec 31, 2019)
8-66178643-C-G		Autosomal dominant nocturnal frontal lobe epilepsy	not provided (-)
8-66178947-G-T		Autosomal dominant nocturnal frontal lobe epilepsy • CRH-related disorder	Likely benign (Feb 09, 2022)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP