LINC01766

long intergenic non-protein coding RNA 1766, the group of Long intergenic non-protein coding RNAs

Basic information

Region (hg38): 19:35557656-35601596

Links

ENSG00000224910 ∙ NCBI:102723617 ∙ ∙ HGNC:52556 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the LINC01766 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the LINC01766 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in LINC01766

This is a list of pathogenic ClinVar variants found in the LINC01766 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
19-35557668-G-T			Benign (Oct 17, 2022)
19-35557673-G-A			Likely benign (Mar 02, 2023)
19-35557675-C-T		not specified	Uncertain significance (Oct 07, 2024)
19-35557695-G-T			Likely benign (May 04, 2018)
19-35557744-T-C		not specified	Uncertain significance (Dec 13, 2023)
19-35557759-C-T			Likely benign (Oct 17, 2024)
19-35557763-A-G		not specified	Uncertain significance (May 17, 2023)
19-35557778-G-T		not specified	Uncertain significance (Feb 26, 2025)
19-35557826-C-T		not specified	Uncertain significance (Nov 13, 2024)
19-35557834-G-T			Uncertain significance (Dec 26, 2021)
19-35557839-G-T			Benign (Feb 03, 2025)
19-35557857-G-C			Uncertain significance (Feb 18, 2022)
19-35557858-G-C			Likely benign (Apr 03, 2023)
19-35557862-G-A			Benign (Sep 04, 2024)
19-35557866-G-A			Likely benign (Nov 11, 2024)
19-35558357-C-A			Benign (Feb 03, 2025)
19-35558376-T-G			Likely benign (Jan 28, 2025)
19-35558401-T-A		not specified	Uncertain significance (Oct 03, 2022)
19-35558406-G-T		not specified	Uncertain significance (May 22, 2023)
19-35558434-G-A			Benign (Nov 11, 2024)
19-35558468-G-A		not specified	Uncertain significance (Jan 24, 2025)
19-35558492-A-T		not specified	Uncertain significance (Oct 10, 2023)
19-35558582-G-A		not specified	Uncertain significance (Nov 29, 2023)
19-35558591-C-G		not specified	Uncertain significance (Jan 31, 2023)
19-35558598-C-G		not specified	Uncertain significance (Nov 30, 2021)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP