MAMDC2-AS1

MAMDC2 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 9:70010139-70258924

Links

ENSG00000204706 ∙ NCBI:100507244 ∙ ∙ HGNC:48719 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the MAMDC2-AS1 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the MAMDC2-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			4	1	2	7
Total	0	0	4	1	2

Variants in MAMDC2-AS1

This is a list of pathogenic ClinVar variants found in the MAMDC2-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
9-70044607-G-A		Malignant tumor of prostate	Uncertain significance (-)
9-70044628-G-A		not specified	Uncertain significance (Feb 13, 2024)
9-70044667-G-T		not specified	Uncertain significance (Sep 16, 2021)
9-70108217-A-G		not specified	Uncertain significance (Jul 11, 2023)
9-70108234-T-A		not specified	Uncertain significance (Apr 19, 2024)
9-70108300-T-C		not specified	Uncertain significance (Dec 08, 2023)
9-70108372-A-G		not specified	Likely benign (Feb 13, 2024)
9-70108386-T-G		not specified	Uncertain significance (Dec 18, 2023)
9-70108408-T-C		not specified	Uncertain significance (Aug 02, 2021)
9-70108423-C-T		not specified	Uncertain significance (Oct 01, 2024)
9-70109748-G-C		not specified	Uncertain significance (Aug 08, 2023)
9-70109792-G-A		not specified	Uncertain significance (Nov 09, 2022)
9-70113036-C-T		not specified	Uncertain significance (Jul 30, 2024)
9-70113063-G-T		not specified	Uncertain significance (Oct 12, 2024)
9-70113081-C-T		not specified	Uncertain significance (Jun 07, 2024)
9-70113084-A-G		not specified	Uncertain significance (Jun 06, 2023)
9-70126233-A-G		not specified	Uncertain significance (Aug 05, 2024)
9-70126278-C-A		not specified	Uncertain significance (Aug 20, 2024)
9-70126332-G-A		not specified	Uncertain significance (Dec 12, 2023)
9-70126337-A-C		not specified	Uncertain significance (Mar 07, 2023)
9-70126363-A-G		not specified	Likely benign (Sep 14, 2022)
9-70126401-C-G		not specified	Uncertain significance (Jun 16, 2024)
9-70131576-A-T		not specified	Uncertain significance (Feb 03, 2022)
9-70131610-C-G		not specified	Uncertain significance (Feb 03, 2022)
9-70140160-C-T		not specified	Uncertain significance (Sep 17, 2021)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP