PGR-AS1

PGR antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 11:101127308-101342264

Links

ENSG00000282728 ∙ NCBI:101054525 ∙ ∙ HGNC:52650 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the PGR-AS1 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the PGR-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in PGR-AS1

This is a list of pathogenic ClinVar variants found in the PGR-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
11-101127443-T-C		not specified	Uncertain significance (Feb 05, 2024)
11-101127456-G-A		not specified	Uncertain significance (Aug 12, 2021)
11-101127464-T-G			Benign (Nov 20, 2018)
11-101127496-G-A			Likely benign (Apr 11, 2018)
11-101127596-C-A		not specified	Uncertain significance (Feb 22, 2023)
11-101127599-G-C		not specified	Uncertain significance (May 04, 2022)
11-101127627-C-T		not specified	Uncertain significance (Dec 16, 2023)
11-101127633-A-C		not specified	Uncertain significance (Aug 12, 2021)
11-101127728-A-G		not specified	Uncertain significance (Nov 22, 2021)
11-101127748-G-C			Likely benign (Jun 26, 2018)
11-101127766-C-G			Likely benign (Jun 08, 2018)
11-101127770-G-C		not specified	Uncertain significance (Jun 19, 2024)
11-101127800-G-C		not specified	Uncertain significance (Dec 21, 2022)
11-101127827-G-C		not specified	Uncertain significance (May 31, 2023)
11-101127840-G-C		not specified	Uncertain significance (Jul 06, 2021)
11-101127848-C-T		not specified	Uncertain significance (Mar 28, 2024)
11-101127887-T-C		not specified	Uncertain significance (Apr 08, 2024)
11-101127887-T-G		not specified	Uncertain significance (Jan 10, 2022)
11-101127936-C-T		not specified	Uncertain significance (Jan 02, 2024)
11-101127951-A-C		not specified	Uncertain significance (Feb 14, 2023)
11-101128031-C-G			Benign (Dec 31, 2019)
11-101128059-C-T		not specified	Uncertain significance (Sep 25, 2023)
11-101128095-C-T		not specified	Uncertain significance (Jul 19, 2023)
11-101128138-G-A			Likely benign (Feb 01, 2023)
11-101128175-G-T		not specified	Uncertain significance (May 14, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP