PRC1-AS1

PRC1 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 15:90966340-90988625

Links

ENSG00000258725 ∙ NCBI:100507118 ∙ ∙ HGNC:48587 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the PRC1-AS1 gene.

• Inborn genetic diseases (26 variants)
• Familial cancer of breast (18 variants)
• Breast carcinoma (2 variants)
• not provided (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the PRC1-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)			1			1
splice region						0
non coding			43		1	44
Total	0	0	44	0	1

Variants in PRC1-AS1

This is a list of pathogenic ClinVar variants found in the PRC1-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
15-90966362-T-C		Familial cancer of breast	Uncertain significance (Feb 01, 2014)
15-90966398-C-T		Familial cancer of breast	Uncertain significance (Feb 01, 2014)
15-90966504-A-G		Familial cancer of breast	Uncertain significance (Feb 01, 2014)
15-90966690-G-T		Familial cancer of breast	Uncertain significance (Feb 01, 2014)
15-90966789-T-C		Familial cancer of breast	Uncertain significance (Feb 01, 2014)
15-90967192-G-A		not specified	Uncertain significance (Feb 28, 2023)
15-90968030-A-G		Familial cancer of breast	Uncertain significance (Feb 01, 2014)
15-90969115-A-C		not specified	Uncertain significance (Sep 12, 2023)
15-90969457-G-A		not specified	Uncertain significance (Jan 03, 2022)
15-90969493-C-T		not specified	Uncertain significance (Sep 14, 2022)
15-90969524-C-A		not specified	Uncertain significance (Feb 10, 2022)
15-90969539-C-T		not specified	Uncertain significance (Aug 22, 2023)
15-90969561-G-C		not specified	Uncertain significance (Oct 17, 2023)
15-90969577-C-T		not specified	Uncertain significance (Oct 05, 2023)
15-90969584-G-A		not specified	Uncertain significance (May 21, 2024)
15-90970417-G-A		not specified	Uncertain significance (Nov 29, 2023)
15-90970423-A-C		not specified	Uncertain significance (Jan 08, 2024)
15-90970426-C-T		not specified	Uncertain significance (May 26, 2023)
15-90970433-C-T		not specified	Uncertain significance (Apr 26, 2023)
15-90970444-T-C		Familial cancer of breast	Uncertain significance (Feb 01, 2014)
15-90970469-G-A		not specified	Uncertain significance (Feb 17, 2022)
15-90970480-T-C		not specified	Uncertain significance (Feb 27, 2024)
15-90971530-C-T		Breast carcinoma	association (Feb 01, 2014)
15-90974140-C-A		not specified	Uncertain significance (May 12, 2024)
15-90974174-G-C		not specified	Uncertain significance (Feb 07, 2023)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP