PRMT5-DT

PRMT5 divergent transcript, the group of Divergent transcripts

Basic information

Region (hg38): 14:22929607-22956436

Links

ENSG00000257285 ∙ NCBI:101926933 ∙ ∙ HGNC:55482 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the PRMT5-DT gene.

• Inborn genetic diseases (9 variants)
• not provided (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the PRMT5-DT gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			8	1	1	10
Total	0	0	8	1	1

Variants in PRMT5-DT

This is a list of pathogenic ClinVar variants found in the PRMT5-DT region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
14-22946530-G-A		not specified	Uncertain significance (Jan 28, 2025)
14-22946568-T-C		not specified	Uncertain significance (Jan 24, 2025)
14-22946569-T-G		not specified	Uncertain significance (Oct 04, 2022)
14-22946641-A-C		not specified	Uncertain significance (Dec 19, 2023)
14-22946703-C-T		not specified	Uncertain significance (Feb 16, 2023)
14-22947180-C-T		not specified	Uncertain significance (Apr 12, 2024)
14-22947205-T-C		not specified	Uncertain significance (Feb 14, 2025)
14-22947211-T-A		not specified	Uncertain significance (Jun 09, 2022)
14-22947214-C-T		not specified	Uncertain significance (Jun 26, 2024)
14-22947912-C-T		not specified	Uncertain significance (Jun 05, 2023)
14-22947963-C-A		not specified	Uncertain significance (Jul 26, 2024)
14-22947996-C-T		not specified	Uncertain significance (Jun 04, 2024)
14-22948007-T-G		not specified	Uncertain significance (Jan 31, 2023)
14-22950328-T-C			Benign (May 24, 2018)
14-22950343-G-A		not specified	Uncertain significance (Sep 17, 2021)
14-22950399-C-G		not specified	Uncertain significance (Dec 01, 2023)
14-22951581-G-A		not specified	Uncertain significance (Mar 07, 2025)
14-22951586-G-A		not specified	Uncertain significance (Oct 17, 2023)
14-22951598-C-T		not specified	Uncertain significance (Aug 21, 2024)
14-22951625-T-C		not specified	Uncertain significance (Nov 23, 2024)
14-22951628-C-T		not specified	Uncertain significance (Dec 01, 2022)
14-22951683-C-T		not specified	Uncertain significance (May 30, 2024)
14-22952348-C-A		not specified	Likely benign (Aug 21, 2023)
14-22952359-T-C		not specified	Uncertain significance (Jul 03, 2024)
14-22952392-T-G		not specified	Uncertain significance (Mar 25, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP