SCAND2P

pseudo

SCAN domain containing 2 pseudogene

Gene summary

Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Jul 2025]

Previous symbols:

SCAND2

MANE transcript

N/A

Inheritance

—

ClinVar variants

—

Top phenotype

Galloway-Mowat syndrome 1

Max pathogenic AF

—

Genomic locus

chr15:84,631,963-84,642,066

External References & Databases

Ensembl (ENSG00000176700)

GenCC Phenotypes & Disease Associations

Curated gene-disease validity assertions and inheritance patterns

No GenCC data available for this gene.

ClinVar Associated Diseases & Phenotypes

Reported disease conditions connected to SCAND2P variants in ClinVar

6 Conditions Cataloged

not providedTotal: 86

Galloway-Mowat syndrome 1Total: 35

Inborn genetic diseasesTotal: 13

not specifiedTotal: 2

Nephrotic syndromeTotal: 2

Dystonic disorderTotal: 1

ClinVar Variants & Pathogenicity by Type

Statistics based on transcript . Only rare variants are included.

We include only reliable ClinVar variants with their consequences to MANE Select, MANE Plus Clinical transcripts, or transcripts with TSL equal to 1. Click a count to filter the variants table below.

Slight differences between displayed counts and ClinVar may occur due to a different transcript/consequence chosen by our variant effect predictor, or because we classify Benign/Likely benign as Likely benign and Pathogenic/Likely pathogenic as Likely pathogenic.

Effect	PathogenicP	Likely pathogenicLP	VUS	Likely benignLB	BenignB
synonymous
missense
nonsense
start loss
frameshift
splice donor/acceptor (+/-2bp)
Total	0	0	0	0	0

Highest pathogenic variant AF is 0.0000131454

Loading ClinVar variants...

Transcript Catalog

Annotated transcript isoforms across RefSeq and Ensembl databases

Showing 0 of 0 transcripts

Transcript ID	Source	Protein ID	Coding Exons	MANE Status
No transcripts match your selected source or search query.

Gene Ontology (GO) Annotations & Pathways

Biological processes, molecular functions, cellular components and pathways

Biological Process

regulation of transcription, DNA-templated
biological_process

Molecular Function

molecular_function
DNA-binding transcription factor activity

Cellular Component

cellular_component
nucleus

dbNSFP Gene Annotations

Source: dbNSFP