SEMA3B-AS1

SEMA3B antisense RNA 1 (head to head), the group of Antisense RNAs

Basic information

Region (hg38): 3:50265974-50276052

Links

ENSG00000232352 ∙ NCBI:101928931 ∙ ∙ HGNC:49096 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the SEMA3B-AS1 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the SEMA3B-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in SEMA3B-AS1

This is a list of pathogenic ClinVar variants found in the SEMA3B-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
3-50269247-C-T		SEMA3B-related disorder • not specified	Uncertain significance (Mar 19, 2024)
3-50269248-G-A		SEMA3B-related disorder	Uncertain significance (Aug 23, 2024)
3-50269251-C-A		not specified	Uncertain significance (Jan 09, 2024)
3-50269252-C-T		SEMA3B-related disorder	Likely benign (Jun 28, 2022)
3-50269253-G-A		SEMA3B-related disorder • not specified	Uncertain significance (Feb 08, 2025)
3-50269261-C-T		SEMA3B-related disorder	Likely benign (Jan 12, 2022)
3-50269262-G-T		SEMA3B-related disorder	Uncertain significance (Aug 05, 2024)
3-50269265-G-A		SEMA3B-related disorder • not specified	Likely benign (Jun 21, 2022)
3-50269272-C-T		SEMA3B-related disorder	Uncertain significance (Apr 03, 2024)
3-50269276-C-A		SEMA3B-related disorder	Likely benign (Nov 08, 2022)
3-50269301-C-G		not specified	Uncertain significance (Sep 30, 2021)
3-50269303-G-A		SEMA3B-related disorder	Likely benign (Jan 30, 2023)
3-50269311-C-T		SEMA3B-related disorder	Uncertain significance (Aug 08, 2024)
3-50269312-C-T		SEMA3B-related disorder	Likely benign (May 19, 2021)
3-50269320-G-C		SEMA3B-related disorder	Uncertain significance (Apr 09, 2024)
3-50269320-G-GC		SEMA3B-related disorder	Benign (Jun 17, 2021)
3-50269321-C-G		SEMA3B-related disorder	Likely benign (Jan 22, 2024)
3-50269326-C-G		SEMA3B-related disorder	Uncertain significance (May 10, 2024)
3-50269328-C-T		SEMA3B-related disorder	Likely benign (Mar 29, 2023)
3-50269329-G-A		SEMA3B-related disorder	Uncertain significance (Jul 05, 2024)
3-50269330-C-T		SEMA3B-related disorder	Likely benign (Mar 23, 2024)
3-50269335-G-T		SEMA3B-related disorder	Uncertain significance (Sep 06, 2024)
3-50270164-G-A		SEMA3B-related disorder	Likely benign (Jun 07, 2022)
3-50270172-C-T		not specified	Uncertain significance (Jan 24, 2024)
3-50270182-C-T		SEMA3B-related disorder	Uncertain significance (Jun 06, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP