SF1-DT

SF1 divergent transcript, the group of Divergent transcripts

Basic information

Region (hg38): 11:64778085-64779405

Links

ENSG00000269038 ∙ ∙ ∙ HGNC:55278 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the SF1-DT gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the SF1-DT gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in SF1-DT

This is a list of pathogenic ClinVar variants found in the SF1-DT region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
11-64778088-G-A		not specified	Uncertain significance (Sep 16, 2021)
11-64778097-G-A		not specified	Uncertain significance (Jun 17, 2022)
11-64778098-G-A		not specified	Uncertain significance (Apr 19, 2024)
11-64778103-G-A		not specified	Uncertain significance (Aug 16, 2021)
11-64778106-T-C		not specified	Uncertain significance (Sep 30, 2024)
11-64778122-A-C		not specified	Uncertain significance (Mar 07, 2023)
11-64778146-G-A		not specified	Uncertain significance (Nov 06, 2023)
11-64778161-G-A		not specified	Uncertain significance (Nov 28, 2024)
11-64778166-G-A		not specified	Uncertain significance (Apr 07, 2022)
11-64778221-C-T		not specified	Uncertain significance (Aug 11, 2024)
11-64778223-C-G		not specified	Uncertain significance (Dec 01, 2022)
11-64778308-C-G		not specified	Uncertain significance (Aug 15, 2023)
11-64778338-G-A		not specified	Uncertain significance (Dec 28, 2023)
11-64778375-G-C		not specified	Uncertain significance (Aug 17, 2021)
11-64778375-G-T		not specified	Uncertain significance (Feb 28, 2023)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP