SNHG14

small nucleolar RNA host gene 14, the group of Small nucleolar RNA non-coding host genes

Basic information

Previous symbols: [ "UBE3A-AS1" ]

Links

ENSG00000224078

∙ NCBI:104472715 ∙ OMIM:616259 ∙ HGNC:37462 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the SNHG14 gene.

Angelman syndrome (547 variants)
not provided (257 variants)
Inborn genetic diseases (67 variants)
not specified (65 variants)
UBE3A-related condition (10 variants)
Intellectual disability (6 variants)
See cases (4 variants)
- (2 variants)
Epileptic encephalopathy (1 variants)
Developmental disorder (1 variants)
Neurodevelopmental disorder (1 variants)
Developmental delay;Intellectual disability (1 variants)
Autism (1 variants)
6 conditions (1 variants)
Normal pregnancy (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the SNHG14 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region ? Intron variants in splice region, excluding donor/acceptor (+/-2bp)						0
non coding ? UTR, intron and other, non coding variants	172 clinvar	63 clinvar	282 clinvar	206 clinvar	32 clinvar	755
Total	172	63	282	206	32

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP