SNRK-AS1

SNRK antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 3:43346923-43352152

Links

ENSG00000234617 ∙ ∙ ∙ HGNC:41269 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the SNRK-AS1 gene.

• Inborn genetic diseases (16 variants)
• not provided (3 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the SNRK-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			17		2	19
Total	0	0	17	0	2

Variants in SNRK-AS1

This is a list of pathogenic ClinVar variants found in the SNRK-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
3-43347529-C-T		not specified	Uncertain significance (Aug 04, 2023)
3-43347658-T-G		not specified	Uncertain significance (Dec 02, 2022)
3-43347659-T-G		not specified	Uncertain significance (Dec 02, 2022)
3-43347747-C-T			Benign (Dec 31, 2019)
3-43347827-A-C		not specified	Uncertain significance (Nov 22, 2023)
3-43347832-C-T		not specified	Uncertain significance (Nov 15, 2021)
3-43347916-C-T		not specified	Uncertain significance (Sep 30, 2022)
3-43348004-G-A			Uncertain significance (Oct 04, 2021)
3-43348017-A-G			Benign (Dec 31, 2019)
3-43348090-G-A		not specified	Uncertain significance (Jul 06, 2021)
3-43348130-G-A		not specified	Uncertain significance (Jan 26, 2023)
3-43348132-C-T		not specified	Uncertain significance (Sep 06, 2022)
3-43348156-A-G		not specified	Uncertain significance (Mar 07, 2023)
3-43348183-G-A		not specified	Uncertain significance (Jun 24, 2022)
3-43348207-A-G		not specified	Uncertain significance (May 26, 2022)
3-43348222-G-A		not specified	Uncertain significance (Jan 18, 2022)
3-43348225-T-G		not specified	Uncertain significance (Jan 03, 2024)
3-43348287-T-G		not specified	Uncertain significance (Mar 20, 2023)
3-43348322-G-C		not specified	Uncertain significance (Oct 12, 2022)
3-43348414-G-A		not specified	Uncertain significance (Jun 01, 2023)
3-43348418-G-A		not specified	Uncertain significance (Dec 16, 2023)
3-43348430-A-G		not specified	Uncertain significance (Jul 14, 2021)
3-43348442-A-G		not specified	Uncertain significance (Dec 14, 2022)
3-43348486-A-G		not specified	Uncertain significance (Mar 24, 2023)
3-43348516-C-A		not specified	Uncertain significance (Jun 16, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP