STAT4-AS1

STAT4 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 2:191021526-191032314

Links

ENSG00000231858 ∙ NCBI:105373805 ∙ ∙ HGNC:55764 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the STAT4-AS1 gene.

• not provided (20 variants)
• Inborn genetic diseases (2 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the STAT4-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			9	11		20
Total	0	0	9	11	0

Variants in STAT4-AS1

This is a list of pathogenic ClinVar variants found in the STAT4-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
2-191029849-A-G			Likely benign (Oct 26, 2022)
2-191030962-G-A			Likely benign (Feb 11, 2023)
2-191030973-G-A			Uncertain significance (Mar 08, 2021)
2-191030975-A-C			Likely benign (Aug 11, 2021)
2-191030975-A-G			Likely benign (Dec 18, 2021)
2-191030979-T-G			Uncertain significance (Jul 19, 2022)
2-191030982-ATTG-A			Uncertain significance (Oct 24, 2022)
2-191030984-T-A			Likely benign (Nov 29, 2022)
2-191030985-G-T			Uncertain significance (Nov 28, 2023)
2-191030989-T-C		not specified	Uncertain significance (May 11, 2023)
2-191031014-C-T			Likely benign (Oct 13, 2023)
2-191031018-T-C			Uncertain significance (Oct 05, 2023)
2-191031020-C-A			Likely benign (Jan 22, 2023)
2-191031041-A-C			Likely benign (Aug 17, 2023)
2-191031065-T-C			Likely benign (Jan 28, 2022)
2-191031078-C-T			Uncertain significance (Oct 05, 2023)
2-191031094-C-T			Likely benign (Feb 22, 2022)
2-191031096-A-C			Likely benign (Jun 02, 2023)
2-191031097-G-C			Likely benign (Mar 17, 2023)
2-191031432-G-A			Likely benign (Aug 04, 2023)
2-191031440-C-T			Likely benign (Jan 08, 2024)
2-191031451-T-C		not specified	Uncertain significance (Jun 09, 2022)
2-191031493-C-G			Uncertain significance (Oct 22, 2023)
2-191031497-C-G			Uncertain significance (Feb 20, 2022)
2-191031499-T-C			Uncertain significance (Nov 20, 2023)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP