TARID

TCF21 antisense RNA inducing promoter demethylation, the group of Long non-coding RNAs with non-systematic symbols

Basic information

Previous symbols: [ "EYA4-AS1" ]

Links

ENSG00000227954

∙ NCBI:100507308 ∙ OMIM:616058 ∙ HGNC:50506 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the TARID gene.

Dilated cardiomyopathy 1J (233 variants)
not provided (101 variants)
Autosomal dominant nonsyndromic hearing loss 10 (71 variants)
Cardiovascular phenotype (57 variants)
not specified (17 variants)
Dilated cardiomyopathy 1J;Autosomal dominant nonsyndromic hearing loss 10 (11 variants)
Inborn genetic diseases (7 variants)
Autosomal dominant nonsyndromic hearing loss 10;Dilated cardiomyopathy 1J (4 variants)
EYA4-related condition (4 variants)
Dilated Cardiomyopathy, Dominant (3 variants)
Nonsyndromic Hearing Loss, Dominant (3 variants)
Hearing impairment (2 variants)
EYA4-Related Disorders (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the TARID gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)			1 clinvar			1
splice region ? Intron variants in splice region, excluding donor/acceptor (+/-2bp)						0
non coding ? UTR, intron and other, non coding variants	10 clinvar	5 clinvar	186 clinvar	100 clinvar	33 clinvar	334
Total	10	5	187	100	33

Highest pathogenic variant AF is 0.00000657

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP