TET2-AS1
Basic information
Region (hg38): 4:105171354-105353011
Links
Phenotypes
GenCC
Source:
ClinVar
This is a list of variants' phenotypes submitted to
Variants pathogenicity by type
Statistics on ClinVar variants can assist in determining whether a specific variant type in the TET2-AS1 gene is commonly pathogenic or not.
In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.
Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.
Variant type | Pathogenic | Likely pathogenic | VUS | Likely benign | Benign | Sum |
---|---|---|---|---|---|---|
synonymous | 0 | |||||
missense | 0 | |||||
nonsense | 0 | |||||
start loss | 0 | |||||
frameshift | 0 | |||||
inframe indel | 0 | |||||
splice donor/acceptor (+/-2bp) | 0 | |||||
splice region | 0 | |||||
non coding | 0 | |||||
Total | 0 | 0 | 0 | 0 | 0 |
Variants in TET2-AS1
This is a list of pathogenic ClinVar variants found in the TET2-AS1 region.
You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.
Position | Type | Phenotype | Significance | ClinVar |
---|---|---|---|---|
4-105233833-TATAGATAG-T | not specified | Benign (Jan 24, 2024) | ||
4-105233951-G-A | not specified | Likely benign (Nov 28, 2024) | ||
4-105233952-G-T | not specified | Uncertain significance (Dec 04, 2024) | ||
4-105233957-A-G | not specified | Likely benign (Oct 15, 2024) | ||
4-105233963-C-T | Likely benign (Sep 05, 2023) | |||
4-105233964-C-G | Likely benign (Dec 16, 2024) | |||
4-105233977-A-G | not specified | Uncertain significance (Dec 17, 2024) | ||
4-105233978-C-T | Likely benign (Jun 15, 2018) | |||
4-105233979-A-C | not specified | Benign/Likely benign (Feb 02, 2025) | ||
4-105233997-A-C | not specified | Uncertain significance (Dec 22, 2024) | ||
4-105234002-A-C | not specified | Likely benign (Feb 15, 2025) | ||
4-105234003-T-A | Uncertain significance (Jan 19, 2025) | |||
4-105234016-G-T | not specified | Uncertain significance (Oct 04, 2024) | ||
4-105234022-C-G | not specified | Uncertain significance (Jan 05, 2025) | ||
4-105234023-A-G | not specified | Likely benign (Jan 01, 2025) | ||
4-105234027-C-T | not specified | Uncertain significance (Feb 09, 2025) | ||
4-105234028-C-G | not specified | Benign (Feb 03, 2025) | ||
4-105234031-T-C | not specified | Uncertain significance (Dec 31, 2024) | ||
4-105234037-C-T | Uncertain significance (Jan 25, 2022) | |||
4-105234042-C-T | not specified | Benign (Feb 03, 2025) | ||
4-105234043-T-C | not specified | Uncertain significance (Mar 07, 2025) | ||
4-105234053-A-G | not specified | Likely benign (Dec 20, 2024) | ||
4-105234055-G-T | Uncertain significance (Jun 02, 2022) | |||
4-105234058-C-T | not specified | Uncertain significance (Mar 01, 2025) | ||
4-105234078-C-G | not specified | Uncertain significance (Jan 25, 2025) |
GnomAD
Source:
dbNSFP
Source: