TEX26-AS1

TEX26 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 13:30881933-30933846

Previous symbols: [ "LINC00447" ]

Links

ENSG00000224743NCBI:100507064HGNC:42784GenCCjaxSfariGnomADPubmedClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the TEX26-AS1 gene.

  • Inborn genetic diseases (10 variants)
  • not provided (2 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the TEX26-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type Pathogenic Likely pathogenic VUS Likely benign Benign Sum
synonymous
0
missense
0
nonsense
0
start loss
0
frameshift
0
inframe indel
0
splice donor/acceptor (+/-2bp)
0
splice region
0
non coding
10
clinvar
2
clinvar
12
Total 0 0 10 2 0

Variants in TEX26-AS1

This is a list of pathogenic ClinVar variants found in the TEX26-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position Type Phenotype Significance ClinVar
13-30906553-G-A not specified Uncertain significance (Nov 09, 2023)3125094
13-30906588-C-A not specified Uncertain significance (Dec 13, 2022)2385503
13-30906706-C-G not specified Uncertain significance (Jan 03, 2024)3125091
13-30906740-C-A not specified Uncertain significance (Jan 17, 2024)3125092
13-30906741-G-T not specified Uncertain significance (Mar 25, 2024)3294083
13-30906748-T-A not specified Uncertain significance (May 15, 2023)2515072
13-30906759-G-A not specified Uncertain significance (Jul 30, 2023)2602840
13-30917428-G-T not specified Uncertain significance (Dec 09, 2023)3125093
13-30921020-C-A not specified Uncertain significance (Dec 20, 2023)3125095
13-30921021-G-A Likely benign (Nov 01, 2022)2643712
13-30921025-G-A not specified Uncertain significance (Feb 28, 2024)3125096
13-30921026-C-T not specified Uncertain significance (Jan 24, 2024)3125098
13-30921038-A-T not specified Uncertain significance (May 27, 2022)2292450
13-30921104-T-C not specified Uncertain significance (Feb 10, 2022)2257539
13-30921636-G-T not specified Uncertain significance (Mar 21, 2023)2569955
13-30921681-T-C not specified Uncertain significance (Jan 19, 2024)3125099
13-30921699-G-A not specified Likely benign (Oct 05, 2023)3125100
13-30921709-T-C not specified Uncertain significance (Jul 21, 2021)2226170
13-30921745-C-T not specified Uncertain significance (Nov 29, 2023)3125101
13-30921792-C-G not specified Uncertain significance (Aug 10, 2021)2223503
13-30921809-C-A not specified Uncertain significance (Aug 13, 2021)2370667
13-30924334-T-C not specified Uncertain significance (Apr 26, 2024)3294081
13-30932731-C-A not specified Uncertain significance (Dec 16, 2022)2272578
13-30932754-C-T Likely benign (Mar 01, 2023)2643713

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP