TEX26-AS1
Basic information
Region (hg38): 13:30881933-30933846
Previous symbols: [ "LINC00447" ]
Links
Phenotypes
GenCC
Source:
ClinVar
This is a list of variants' phenotypes submitted to
- Inborn genetic diseases (10 variants)
- not provided (2 variants)
Variants pathogenicity by type
Statistics on ClinVar variants can assist in determining whether a specific variant type in the TEX26-AS1 gene is commonly pathogenic or not.
In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.
Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.
Variant type | Pathogenic | Likely pathogenic | VUS | Likely benign | Benign | Sum |
---|---|---|---|---|---|---|
synonymous | 0 | |||||
missense | 0 | |||||
nonsense | 0 | |||||
start loss | 0 | |||||
frameshift | 0 | |||||
inframe indel | 0 | |||||
splice donor/acceptor (+/-2bp) | 0 | |||||
splice region | 0 | |||||
non coding | 10 | 12 | ||||
Total | 0 | 0 | 10 | 2 | 0 |
Variants in TEX26-AS1
This is a list of pathogenic ClinVar variants found in the TEX26-AS1 region.
You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.
Position | Type | Phenotype | Significance | ClinVar |
---|---|---|---|---|
13-30906553-G-A | not specified | Uncertain significance (Nov 09, 2023) | ||
13-30906588-C-A | not specified | Uncertain significance (Dec 13, 2022) | ||
13-30906706-C-G | not specified | Uncertain significance (Jan 03, 2024) | ||
13-30906740-C-A | not specified | Uncertain significance (Jan 17, 2024) | ||
13-30906741-G-T | not specified | Uncertain significance (Mar 25, 2024) | ||
13-30906748-T-A | not specified | Uncertain significance (May 15, 2023) | ||
13-30906759-G-A | not specified | Uncertain significance (Jul 30, 2023) | ||
13-30917428-G-T | not specified | Uncertain significance (Dec 09, 2023) | ||
13-30921020-C-A | not specified | Uncertain significance (Dec 20, 2023) | ||
13-30921021-G-A | Likely benign (Nov 01, 2022) | |||
13-30921025-G-A | not specified | Uncertain significance (Feb 28, 2024) | ||
13-30921026-C-T | not specified | Uncertain significance (Jan 24, 2024) | ||
13-30921038-A-T | not specified | Uncertain significance (May 27, 2022) | ||
13-30921104-T-C | not specified | Uncertain significance (Feb 10, 2022) | ||
13-30921636-G-T | not specified | Uncertain significance (Mar 21, 2023) | ||
13-30921681-T-C | not specified | Uncertain significance (Jan 19, 2024) | ||
13-30921699-G-A | not specified | Likely benign (Oct 05, 2023) | ||
13-30921709-T-C | not specified | Uncertain significance (Jul 21, 2021) | ||
13-30921745-C-T | not specified | Uncertain significance (Nov 29, 2023) | ||
13-30921792-C-G | not specified | Uncertain significance (Aug 10, 2021) | ||
13-30921809-C-A | not specified | Uncertain significance (Aug 13, 2021) | ||
13-30924334-T-C | not specified | Uncertain significance (Apr 26, 2024) | ||
13-30932731-C-A | not specified | Uncertain significance (Dec 16, 2022) | ||
13-30932754-C-T | Likely benign (Mar 01, 2023) |
GnomAD
Source:
dbNSFP
Source: