TRIM52-AS1

TRIM52 antisense RNA 1 (head to head), the group of Antisense RNAs

Basic information

Region (hg38): 5:181246463-181295573

Links

ENSG00000248275 ∙ NCBI:100507602 ∙ OMIM:619266 ∙ HGNC:49006 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the TRIM52-AS1 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the TRIM52-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	0	0	0

Variants in TRIM52-AS1

This is a list of pathogenic ClinVar variants found in the TRIM52-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
5-181257472-A-G		not specified	Likely benign (Jul 11, 2023)
5-181257488-T-C		not specified	Uncertain significance (Jun 10, 2024)
5-181260006-A-G		not specified	Uncertain significance (May 03, 2023)
5-181260011-T-C		not specified	Uncertain significance (Jan 03, 2022)
5-181260021-C-T		not specified	Uncertain significance (Jun 16, 2024)
5-181260176-G-A		not specified	Uncertain significance (Nov 07, 2022)
5-181260254-C-T		not specified	Uncertain significance (May 26, 2022)
5-181260259-C-A		not specified	Uncertain significance (Dec 12, 2023)
5-181260334-G-T		not specified	Uncertain significance (Jun 02, 2023)
5-181260347-G-T		not specified	Likely benign (Dec 27, 2022)
5-181260349-T-A		not specified	Uncertain significance (Aug 10, 2021)
5-181260398-A-C		not specified	Uncertain significance (Nov 21, 2022)
5-181260407-A-G		not specified	Uncertain significance (Mar 15, 2024)
5-181260476-T-C		not specified	Uncertain significance (Aug 28, 2023)
5-181260516-C-T		not specified	Uncertain significance (Apr 20, 2024)
5-181260526-G-C		not specified	Uncertain significance (Feb 28, 2024)
5-181260560-A-G		not specified	Uncertain significance (Apr 09, 2024)
5-181260578-T-A		not specified	Uncertain significance (Jan 26, 2022)
5-181260602-G-A		not specified	Uncertain significance (Nov 07, 2022)
5-181260670-C-A		not specified	Uncertain significance (May 16, 2024)
5-181260737-T-G		not specified	Uncertain significance (Apr 07, 2022)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP