TXNDC11-AS1

TXNDC11 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 16:11741910-11768533

Links

ENSG00000262420 ∙ ∙ ∙ HGNC:56375 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the TXNDC11-AS1 gene.

• Inborn genetic diseases (7 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the TXNDC11-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			7			7
Total	0	0	7	0	0

Variants in TXNDC11-AS1

This is a list of pathogenic ClinVar variants found in the TXNDC11-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
16-11742495-G-A		not specified	Uncertain significance (Mar 01, 2023)
16-11742502-G-A		not specified	Uncertain significance (Jun 29, 2023)
16-11742522-A-G		not specified	Uncertain significance (Jan 04, 2024)
16-11742540-T-G		not specified	Uncertain significance (Nov 17, 2022)
16-11742543-G-T		not specified	Uncertain significance (Jun 16, 2024)
16-11742555-G-A		not specified	Uncertain significance (Aug 08, 2022)
16-11742565-A-G		not specified	Uncertain significance (Dec 14, 2022)
16-11742638-G-C		not specified	Uncertain significance (Dec 17, 2023)
16-11742667-C-T		not specified	Uncertain significance (Jun 06, 2023)
16-11742703-C-G		not specified	Uncertain significance (Apr 01, 2024)
16-11742712-G-A		not specified	Uncertain significance (Jun 22, 2023)
16-11751380-G-C		not specified	Uncertain significance (Jul 27, 2022)
16-11751466-A-G		not specified	Uncertain significance (Feb 22, 2023)
16-11752765-G-A		not specified	Uncertain significance (Jan 08, 2024)
16-11756259-G-A		not specified	Uncertain significance (Feb 16, 2023)
16-11756278-C-T		not specified	Uncertain significance (Dec 06, 2021)
16-11756290-T-C		not specified	Uncertain significance (Feb 11, 2022)
16-11756361-A-G		not specified	Uncertain significance (Apr 12, 2022)
16-11761467-C-T		not specified	Uncertain significance (Apr 17, 2023)
16-11761474-T-C		not specified	Uncertain significance (May 30, 2024)
16-11761483-C-T		not specified	Uncertain significance (Nov 05, 2021)
16-11761501-C-G		not specified	Uncertain significance (Jun 03, 2022)
16-11762006-A-G		not specified	Uncertain significance (Sep 27, 2022)
16-11762025-T-C		not specified	Uncertain significance (May 05, 2023)
16-11765110-T-G		not specified	Uncertain significance (Jul 14, 2021)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP