VIPR1-AS1

VIPR1 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 3:42506465-42533258

Links

ENSG00000232354 ∙ ∙ ∙ HGNC:40610 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the VIPR1-AS1 gene.

• not provided (9 variants)
• Inborn genetic diseases (8 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the VIPR1-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			8	4	5	17
Total	0	0	8	4	5

Variants in VIPR1-AS1

This is a list of pathogenic ClinVar variants found in the VIPR1-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
3-42513759-C-T		not specified	Uncertain significance (Apr 26, 2023)
3-42513800-G-A		not specified	Uncertain significance (Jul 05, 2022)
3-42513831-C-A		not specified	Uncertain significance (Jul 06, 2021)
3-42519233-G-T		not specified	Uncertain significance (Nov 12, 2024)
3-42519262-C-A		not specified	Uncertain significance (Sep 19, 2022)
3-42519271-G-A		not specified	Uncertain significance (Jul 09, 2021)
3-42519298-C-G		not specified	Uncertain significance (Feb 28, 2024)
3-42519304-T-C			Likely benign (Aug 15, 2018)
3-42525889-C-A			Likely benign (Feb 09, 2018)
3-42525890-G-A		not specified	Uncertain significance (Sep 24, 2024)
3-42525927-G-A			Benign (Dec 31, 2019)
3-42525944-C-T		not specified	Uncertain significance (Jun 17, 2024)
3-42525971-A-G			Benign (Dec 14, 2017)
3-42525981-G-A			Benign (Apr 16, 2018)
3-42527384-C-T			Likely benign (May 02, 2018)
3-42527399-A-T		not specified	Uncertain significance (Oct 12, 2021)
3-42527411-G-C		not specified	Uncertain significance (May 26, 2024)
3-42527426-G-A		not specified	Uncertain significance (Aug 17, 2022)
3-42527443-C-T			Likely benign (Dec 15, 2017)
3-42527470-C-T			Benign (Jan 09, 2018)
3-42527480-A-G		not specified	Uncertain significance (Aug 12, 2024)
3-42528058-G-A		not specified	Uncertain significance (May 24, 2023)
3-42528101-C-T			Benign (Jun 26, 2018)
3-42528122-C-G		not specified	Uncertain significance (Aug 19, 2024)
3-42528122-C-T		not specified	Uncertain significance (May 29, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP