WTAPP1

Wilms tumor 1 associated protein pseudogene 1

Basic information

Links

ENSG00000255282

∙ NCBI:100288077 ∙ ∙ HGNC:44115 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the WTAPP1 gene.

not provided (49 variants)
Inborn genetic diseases (40 variants)
not specified (6 variants)
Preterm premature rupture of membranes (1 variants)
Pulmonary disease, chronic obstructive, rate of decline of lung function in (1 variants)
Essential tremor (1 variants)
Recessive dystrophic epidermolysis bullosa;COPD, severe early onset (1 variants)
Interstitial lung disease 2 (1 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the WTAPP1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region ? Intron variants in splice region, excluding donor/acceptor (+/-2bp)						0
non coding ? UTR, intron and other, non coding variants	1 clinvar		41 clinvar	13 clinvar	41 clinvar	96
Total	1	0	41	13	41

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP